SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26e20
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.     34   0.56 
BC066975-1|AAH66975.1|  572|Homo sapiens chromosome 3 open readi...    33   1.3  
BC133023-1|AAI33024.1| 1146|Homo sapiens DENND3 protein protein.       31   3.9  
BC114492-1|AAI14493.1|  955|Homo sapiens family with sequence si...    31   3.9  
BC113981-1|AAI13982.1|  955|Homo sapiens family with sequence si...    31   3.9  
BC111041-1|AAI11042.1|  738|Homo sapiens FAM29A protein protein.       31   3.9  
BC065935-1|AAH65935.1|  885|Homo sapiens FAM29A protein protein.       31   3.9  
BC010632-1|AAH10632.1|  354|Homo sapiens FAM29A protein protein.       31   3.9  
AL591206-3|CAI12264.1|  955|Homo sapiens family with sequence si...    31   3.9  
AL591206-2|CAI12263.1|  802|Homo sapiens family with sequence si...    31   3.9  
AL356000-2|CAH72133.1|  955|Homo sapiens family with sequence si...    31   3.9  
AL356000-1|CAH72132.1|  802|Homo sapiens family with sequence si...    31   3.9  
AK023068-1|BAB14388.1|  668|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AK022964-1|BAB14334.1|  802|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AK000067-1|BAA90922.1|  354|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AF537091-1|AAN05700.1|  955|Homo sapiens hypothetical protein pr...    31   3.9  
AF533709-1|AAQ09022.1|  955|Homo sapiens unknown protein protein.      31   3.9  
AB076357-1|BAD01544.1|  140|Homo sapiens functionless protein pr...    31   3.9  
AB046794-1|BAB13400.1|  670|Homo sapiens KIAA1574 protein protein.     31   3.9  
AB020677-1|BAA74893.2| 1019|Homo sapiens KIAA0870 protein protein.     31   3.9  
X04707-1|CAA28412.1|  456|Homo sapiens put.thyroid hormone recep...    31   5.2  
M26747-1|AAA35677.1|  456|Homo sapiens c-erbA protein.                 31   5.2  
BC106930-1|AAI06931.1|  461|Homo sapiens THRB protein protein.         31   5.2  
BC106929-1|AAI06930.1|  461|Homo sapiens thyroid hormone recepto...    31   5.2  
BC073923-1|AAH73923.1|  247|Homo sapiens coenzyme Q10 homolog A ...    30   6.9  
BC047444-1|AAH47444.1|  243|Homo sapiens COQ10A protein protein.       30   6.9  
Z46629-1|CAA86598.1|  509|Homo sapiens SOX9 protein.                   30   9.1  
S74506-1|AAB32870.1|  509|Homo sapiens inactivating mutations as...    30   9.1  
BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein pr...    30   9.1  
BT006875-1|AAP35521.1|  509|Homo sapiens SRY (sex determining re...    30   9.1  
BC056420-1|AAH56420.1|  509|Homo sapiens SRY (sex determining re...    30   9.1  
BC007951-1|AAH07951.1|  509|Homo sapiens SRY (sex determining re...    30   9.1  

>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
          Length = 2469

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 475  CAACCSRQPTVSKARCRRLST-PSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTH-ISSK 648
            CAA     P +S+ + R+    P A   P P  LP+ Q   P  +KC+   +K+H +S K
Sbjct: 993  CAASFRSGPGLSRHKARKHRPHPGAPAEPSPAALPAQQPLEPLAQKCQPPRKKSHRVSGK 1052

Query: 649  SK 654
             +
Sbjct: 1053 ER 1054


>BC066975-1|AAH66975.1|  572|Homo sapiens chromosome 3 open reading
           frame 25 protein.
          Length = 572

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 538 PSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSKSK 654
           P++QP  PP+ +PS ++   R  + + E +KT +S +SK
Sbjct: 73  PASQPQAPPKPIPSFKVLEARDIQEQPEDRKTWLSQRSK 111


>BC133023-1|AAI33024.1| 1146|Homo sapiens DENND3 protein protein.
          Length = 1146

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +1

Query: 529 LSTPSAQPVPPPQMLP---SLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRL 678
           +S P+ Q +  P++ P   SL+LT      C+G S   +++ KS Y +++P +
Sbjct: 419 VSMPNLQDIAMPELAPRNSSLRLTDTAG--CRGSSAVLNVTPKSPYTFKIPEI 469


>BC114492-1|AAI14493.1|  955|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>BC113981-1|AAI13982.1|  955|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>BC111041-1|AAI11042.1|  738|Homo sapiens FAM29A protein protein.
          Length = 738

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 630 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 679


>BC065935-1|AAH65935.1|  885|Homo sapiens FAM29A protein protein.
          Length = 885

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 777 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 826


>BC010632-1|AAH10632.1|  354|Homo sapiens FAM29A protein protein.
          Length = 354

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 246 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 295


>AL591206-3|CAI12264.1|  955|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>AL591206-2|CAI12263.1|  802|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 802

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 711 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 760


>AL356000-2|CAH72133.1|  955|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>AL356000-1|CAH72132.1|  802|Homo sapiens family with sequence
           similarity 29, member A protein.
          Length = 802

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 711 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 760


>AK023068-1|BAB14388.1|  668|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13006 fis, clone NT2RP3000449. ).
          Length = 668

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 560 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 609


>AK022964-1|BAB14334.1|  802|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12902 fis, clone NT2RP2004347. ).
          Length = 802

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 711 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 760


>AK000067-1|BAA90922.1|  354|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20060 fis, clone COL01358. ).
          Length = 354

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 246 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 295


>AF537091-1|AAN05700.1|  955|Homo sapiens hypothetical protein
           protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>AF533709-1|AAQ09022.1|  955|Homo sapiens unknown protein protein.
          Length = 955

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 847 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 896


>AB076357-1|BAD01544.1|  140|Homo sapiens functionless protein
           protein.
          Length = 140

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRK 609
           P++S A+ RR S   ++P P  QML    LT+P  R+
Sbjct: 78  PSLSTAQHRRSSPSHSRPAPGSQMLTGSSLTSPPGRR 114


>AB046794-1|BAB13400.1|  670|Homo sapiens KIAA1574 protein protein.
          Length = 670

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 198 RRKETYDDNFKHHDKRSRSKNKIPKNVRNDLESALVGLCDVWFEDIKPHL 347
           +R+E+Y  N +  ++     +  P+NV+ D     +  CD+  E IKP L
Sbjct: 562 KREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSL 611


>AB020677-1|BAA74893.2| 1019|Homo sapiens KIAA0870 protein protein.
          Length = 1019

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +1

Query: 529 LSTPSAQPVPPPQMLP---SLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRL 678
           +S P+ Q +  P++ P   SL+LT      C+G S   +++ KS Y +++P +
Sbjct: 292 VSMPNLQDIAMPELAPRNSSLRLTDTAG--CRGSSAVLNVTPKSPYTFKIPEI 342


>X04707-1|CAA28412.1|  456|Homo sapiens put.thyroid hormone receptor
           protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 674 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 579
           +G + SY D DE+CV C    +  H RC+    C+
Sbjct: 89  KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 123


>M26747-1|AAA35677.1|  456|Homo sapiens c-erbA protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 674 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 579
           +G + SY D DE+CV C    +  H RC+    C+
Sbjct: 89  KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 123


>BC106930-1|AAI06931.1|  461|Homo sapiens THRB protein protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 674 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 579
           +G + SY D DE+CV C    +  H RC+    C+
Sbjct: 94  KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 128


>BC106929-1|AAI06930.1|  461|Homo sapiens thyroid hormone receptor,
           beta (erythroblastic leukemia viral (v-erb-a) oncogen
           protein.
          Length = 461

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 674 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 579
           +G + SY D DE+CV C    +  H RC+    C+
Sbjct: 94  KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 128


>BC073923-1|AAH73923.1|  247|Homo sapiens coenzyme Q10 homolog A (S.
           cerevisiae) protein.
          Length = 247

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 517 RCRRLS-TPSAQPVPPPQMLP 576
           RC RLS +P AQP PPP  LP
Sbjct: 19  RCCRLSLSPGAQPAPPPGPLP 39


>BC047444-1|AAH47444.1|  243|Homo sapiens COQ10A protein protein.
          Length = 243

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 517 RCRRLS-TPSAQPVPPPQMLP 576
           RC RLS +P AQP PPP  LP
Sbjct: 15  RCCRLSLSPGAQPAPPPGPLP 35


>Z46629-1|CAA86598.1|  509|Homo sapiens SOX9 protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 648
           P   +A  +  + P  QP  PPQ   +  LTT       G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400


>S74506-1|AAB32870.1|  509|Homo sapiens inactivating mutations
           associated with campomelic dysplasia and autosomal XY se
           protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 648
           P   +A  +  + P  QP  PPQ   +  LTT       G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400


>BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein
           protein.
          Length = 986

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 523 RRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTH 636
           RR ++ +     PP+M P L    P+H  C G SQ  H
Sbjct: 459 RRTTSSAVTETGPPEM-PRLPSCCPQHSPCGGSSQNHH 495


>BT006875-1|AAP35521.1|  509|Homo sapiens SRY (sex determining
           region Y)-box 9 (campomelic dysplasia, autosomal
           sex-rever protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 648
           P   +A  +  + P  QP  PPQ   +  LTT       G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400


>BC056420-1|AAH56420.1|  509|Homo sapiens SRY (sex determining
           region Y)-box 9 (campomelic dysplasia, autosomal
           sex-rever protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 648
           P   +A  +  + P  QP  PPQ   +  LTT       G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400


>BC007951-1|AAH07951.1|  509|Homo sapiens SRY (sex determining
           region Y)-box 9 (campomelic dysplasia, autosomal
           sex-rever protein.
          Length = 509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 499 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 648
           P   +A  +  + P  QP  PPQ   +  LTT       G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,776,584
Number of Sequences: 237096
Number of extensions: 2137760
Number of successful extensions: 11169
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -