Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26e06
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U39851-5|AAZ32802.1|  408|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U39851-4|AAZ32803.1|  572|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U39851-3|AAZ32804.1|  563|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF125463-6|AAD12865.1|  301|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    29   3.0  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   4.0  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   4.0  
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical...    29   4.0  
AC024793-1|AAF60692.2|  649|Caenorhabditis elegans Atm (ataxia t...    29   4.0  
Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...    28   5.3  

>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
           protein ZK430.1 protein.
          Length = 1650

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +3

Query: 543 DGELANEIVRERCIKFLSSKIQQLGREIINKEAEELII 656
           D E AN++  E  + F+ S +++   E +NK+ E+L++
Sbjct: 63  DTEFANDLFSEERVDFVRSMLEKGANEELNKQIEKLLL 100


>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071

Query: 348  A 350
            A
Sbjct: 4072 A 4072


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 348  A 350
            A
Sbjct: 4061 A 4061


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 348  A 350
            A
Sbjct: 4061 A 4061


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071

Query: 348  A 350
            A
Sbjct: 4072 A 4072


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 348  A 350
            A
Sbjct: 4061 A 4061


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 171  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 347
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 348  A 350
            A
Sbjct: 4061 A 4061


>U39851-5|AAZ32802.1|  408|Caenorhabditis elegans Hypothetical
           protein C23G10.7a protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +3

Query: 411 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR--ERCI 584
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R  E   
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLRTFETHY 69

Query: 585 KFLSSKIQQLG-REIINKE 638
           KF      ++   +II+K+
Sbjct: 70  KFCPRDCSEIAITKIIHKD 88


>U39851-4|AAZ32803.1|  572|Caenorhabditis elegans Hypothetical
           protein C23G10.7b protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +3

Query: 411 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR--ERCI 584
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R  E   
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLRTFETHY 69

Query: 585 KFLSSKIQQLG-REIINKE 638
           KF      ++   +II+K+
Sbjct: 70  KFCPRDCSEIAITKIIHKD 88


>U39851-3|AAZ32804.1|  563|Caenorhabditis elegans Hypothetical
           protein C23G10.7c protein.
          Length = 563

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +3

Query: 411 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR--ERCI 584
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R  E   
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLRTFETHY 69

Query: 585 KFLSSKIQQLG-REIINKE 638
           KF      ++   +II+K+
Sbjct: 70  KFCPRDCSEIAITKIIHKD 88


>AF125463-6|AAD12865.1|  301|Caenorhabditis elegans Hypothetical
           protein Y49F6C.3 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 444 TEINVVT-NSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKIQQLGR 620
           T+IN      L+ +L  +P      +   +H     ++A  +V E+C++FLS K ++LGR
Sbjct: 189 TDINAADFQCLLEVLYGEPAIEDENVEGILHLAHMYKMA--VVIEKCVEFLSDKSEKLGR 246

Query: 621 E 623
           +
Sbjct: 247 D 247


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 526 CEKIPDKAPLGSLFKIVTREFVTTFISVESSDCNSWANISAIL*VCSL 383
           C + P     GS+   VT    T++I+  SS+C SWA  +    V SL
Sbjct: 13  CGRCPSTTTSGSV--TVTSGTCTSYIADSSSNCASWARTTRFCVVLSL 58


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +3

Query: 195   ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 374
             I +      + +R  + F +KF +    L    +E + +L  +DD    K   KD  +  
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917

Query: 375   KEHK-EHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 488
             + H+  HT     I+ ++  ++   EI     T S  TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +3

Query: 195   ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 374
             I +      + +R  + F +KF +    L    +E + +L  +DD    K   KD  +  
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917

Query: 375   KEHK-EHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 488
             + H+  HT     I+ ++  ++   EI     T S  TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958


>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
           protein Y47D3A.26 protein.
          Length = 1205

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 90  HKKMAGDNI--EKLYKNYDILAAAKDEISQHEKEY 188
           H+K A +N+  +KLYK  + L A  D+IS +E+ +
Sbjct: 827 HRKNAIENLLTKKLYKTKESLTARVDDISDNERRH 861


>AC024793-1|AAF60692.2|  649|Caenorhabditis elegans Atm (ataxia
           telangectasia mutated)family protein 1 protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = +3

Query: 222 KEKRLASQFIAKFFNSFPTLSEQAIEAQFD--LC----EDDDVAIRKQAIKDLPVLCKEH 383
           KE +     + K  NS  + + +A+ + FD  LC    EDDD AIR  ++   P++   +
Sbjct: 76  KEHQFEKNDLEKVDNSLNSAARKAVSSGFDALLCISQLEDDDEAIRASSLIIFPLIDVIY 135

Query: 384 KEHT 395
           K  T
Sbjct: 136 KYET 139


>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = +3

Query: 129 KNYDILAAAKDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQF 308
           K Y+  A     + +H  +Y+  L   +  D+ KR  S+F+A   N+   L     +   
Sbjct: 187 KEYNAEAHRDRILGKHVADYMTYLKE-EDEDRYKRQFSKFLAAGLNA-DNLVATYQKVHS 244

Query: 309 DLCEDDDVAIRKQAIKDLPVLCKE--HKEHTQRIADILAQLLQSEDSTE 449
            +  D   A +K A        K   + E  QR+AD  A LLQ ++  E
Sbjct: 245 AIRADASPAAKKAAKPSKRHTAKRLTYDERKQRVADKKALLLQLKEQQE 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,527,462
Number of Sequences: 27780
Number of extensions: 300855
Number of successful extensions: 818
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)