Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26e04
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-12|AAB37889.1| 187|Caenorhabditis elegans Dj-1 (mammalia... 157 9e-39
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 118 5e-27
AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans fructose-1,6-... 29 2.4
AC006670-1|AAF39910.1| 341|Caenorhabditis elegans Fructose-1,6-... 29 2.4
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 29 4.2
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 29 4.2
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 29 4.2
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 29 4.2
Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical ... 27 9.7
>U80836-12|AAB37889.1| 187|Caenorhabditis elegans Dj-1 (mammalian
transcriptionalregulator) related protein 1.1 protein.
Length = 187
Score = 157 bits (380), Expect = 9e-39
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Frame = +1
Query: 64 KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 240
KSAL+ILA +GAEEME +IT D+L RG + V AGL+G+ PV C+R +VPD L +
Sbjct: 4 KSALIILAAEGAEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED-- 61
Query: 241 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 420
E +++D VILPGG GS++L++S V +LK ++G HGV +
Sbjct: 62 VETEKFDIVILPGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAE 120
Query: 421 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQV 600
VTS+PS ++KL G Y Y E +RVVV G ++TSRGPGTA+ F L ++ELL GK+KA +
Sbjct: 121 LVTSHPSVKEKLEKGGYKYSE-DRVVVSGKIITSRGPGTAFEFALKIVELLEGKDKATSL 179
Query: 601 EKGMLI 618
ML+
Sbjct: 180 IAPMLL 185
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 118 bits (283), Expect = 5e-27
Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
Frame = +1
Query: 64 KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 240
KSAL++L + AEE+E ++T D+L RGG+ V AG + PV C++ +VPD +L +
Sbjct: 5 KSALILLPPEDAEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKDV- 62
Query: 241 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 420
+ + +D +I+PGG G L++ +G LLK +G HG+
Sbjct: 63 -KNKTFDIIIIPGG-PGCSKLAECPVIGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AE 119
Query: 421 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQV 600
RVT + + +DK++ G Y Y++ + VV+ V+TS+GPGTA+ F L ++E L G EK + +
Sbjct: 120 RVTCHYTVKDKMTEGGYKYLD-DNVVISDRVITSKGPGTAFEFALKIVETLEGPEKTNSL 178
Query: 601 EKGMLISQ 624
K + +++
Sbjct: 179 LKPLCLAK 186
>AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans
fructose-1,6-bisphosphatase protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 58 MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 192
M KS+ +EE + +I V+ RRG VT L+GSS + C
Sbjct: 89 MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133
>AC006670-1|AAF39910.1| 341|Caenorhabditis elegans
Fructose-1,6-biphosphatase protein1 protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 58 MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 192
M KS+ +EE + +I V+ RRG VT L+GSS + C
Sbjct: 89 MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 25 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 204
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 205 TLVPDKSLTEALAEKQQYDAVIL 273
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 25 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 204
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 205 TLVPDKSLTEALAEKQQYDAVIL 273
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 25 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 204
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 205 TLVPDKSLTEALAEKQQYDAVIL 273
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 25 LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 204
L NY+ + K+ ++ A+ E + I ++ RRG G +PVL V
Sbjct: 770 LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829
Query: 205 TLVPDKSLTEALAEKQQYDAVIL 273
+ +S ++ KQ D V+L
Sbjct: 830 GIAMGQSGSD--IAKQTADIVLL 850
>Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 553 LTLIELLTGKEKADQVEKGMLISQ 624
L L+EL GK++ D++ K M+ SQ
Sbjct: 288 LILVELWLGKKRQDRIHKDMMASQ 311
>AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 553 LTLIELLTGKEKADQVEKGMLISQ 624
L L+EL GK++ D++ K M+ SQ
Sbjct: 288 LILVELWLGKKRQDRIHKDMMASQ 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.131 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,585,671
Number of Sequences: 27780
Number of extensions: 236974
Number of successful extensions: 435
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -