BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26d24
(719 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 26 1.0
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 26 1.0
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 26 1.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 26 1.4
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 1.4
AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding pr... 25 1.8
AF080546-1|AAC29475.1| 432|Anopheles gambiae S-adenosyl-L-homoc... 25 2.4
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 657 KYTRYWENFHFKFNPKPN 710
K RYW NF NP PN
Sbjct: 628 KIMRYWSNFAKTGNPNPN 645
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 657 KYTRYWENFHFKFNPKPN 710
K RYW NF NP PN
Sbjct: 628 KIMRYWSNFAKTGNPNPN 645
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 657 KYTRYWENFHFKFNPKPN 710
K RYW NF NP PN
Sbjct: 514 KIMRYWSNFAKTGNPNPN 531
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.8 bits (54), Expect = 1.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 68 FGEIIEPSSRTTWEDWDENNSS 133
+ E+ P+ RT W D D NSS
Sbjct: 1682 YDELNRPAVRTKWTDLDTTNSS 1703
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.8 bits (54), Expect = 1.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 68 FGEIIEPSSRTTWEDWDENNSS 133
+ E+ P+ RT W D D NSS
Sbjct: 1683 YDELNRPAVRTKWTDLDTTNSS 1704
>AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding
protein AgamOBP56 protein.
Length = 181
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 168 CF*NCKLVCVSVELLFSSQSSQVVRLDGSIISPKLFIF 55
CF +++C ++E + + +VV DG++I PKL F
Sbjct: 54 CFMEMEVIC-AMECV--GRKKEVVNEDGTLIEPKLMEF 88
>AF080546-1|AAC29475.1| 432|Anopheles gambiae
S-adenosyl-L-homocysteine hydrolase protein.
Length = 432
Score = 25.0 bits (52), Expect = 2.4
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 63 IISEKLLNHQAEL-LGKIGMKITVLQIRKPIY 155
++ +KL + A L L K+G+K+T L R+P Y
Sbjct: 385 VLPKKLDDEVAALHLDKLGVKLTKLSARQPEY 416
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,584
Number of Sequences: 2352
Number of extensions: 14947
Number of successful extensions: 72
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -