Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d24
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094711-1|AAM11064.1|  235|Drosophila melanogaster GH13924p pro...    63   3e-10
AE014297-359|AAF51950.1|  235|Drosophila melanogaster CG2046-PA ...    63   3e-10
AY061209-1|AAL28757.1|  538|Drosophila melanogaster LD15705p pro...    32   0.68 
AE014297-3719|AAZ52545.1|  538|Drosophila melanogaster CG33095-P...    32   0.68 
AE014297-3718|AAF56400.2|  538|Drosophila melanogaster CG33095-P...    32   0.68 
BT001868-1|AAN71638.1|  538|Drosophila melanogaster SD03344p pro...    31   2.1  
AY051573-1|AAK92997.1|  337|Drosophila melanogaster GH21948p pro...    29   4.8  
AE014134-2637|AAF53483.1|  337|Drosophila melanogaster CG3793-PA...    29   4.8  
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      29   8.4  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    29   8.4  
AE014297-4165|AAN14124.1|  424|Drosophila melanogaster CG31055-P...    29   8.4  
AE014297-4164|AAN14123.1|  436|Drosophila melanogaster CG31055-P...    29   8.4  
AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-P...    29   8.4  

>AY094711-1|AAM11064.1|  235|Drosophila melanogaster GH13924p
           protein.
          Length = 235

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
 Frame = +2

Query: 68  FGEIIEPSSRTTWEDWDEN---NSSTDTQTNLQFQKHIE---IPNDIEIFILLEGKYLAH 229
           FGE+  PSSR  W+D DE+   N     +  L+F    +    P + E+ +++EG  + H
Sbjct: 6   FGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPVESEMLVVIEGVNVTH 65

Query: 230 SIKQNV-CNLELINSVPEISLKIYKMHSLESYVXXXXXXXXXXXXXXXHLLEKYITNSKK 406
                +  + + + ++P  +  ++  HS +  +                LL  Y+  +KK
Sbjct: 66  FASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAIINEDLTSSGEVA-ELLLPYVKLAKK 124

Query: 407 VISMITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVCLR 586
           VI++  KP VE+ + ++      I  +         +++   LE PN I+G++AGV   R
Sbjct: 125 VITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQKDITE---LEAPNFIAGVAAGVASWR 181

Query: 587 EHLDLSALALVFYTE 631
           + ++L   + V YT+
Sbjct: 182 DQMELPVTSFVIYTD 196


>AE014297-359|AAF51950.1|  235|Drosophila melanogaster CG2046-PA
           protein.
          Length = 235

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
 Frame = +2

Query: 68  FGEIIEPSSRTTWEDWDEN---NSSTDTQTNLQFQKHIE---IPNDIEIFILLEGKYLAH 229
           FGE+  PSSR  W+D DE+   N     +  L+F    +    P + E+ +++EG  + H
Sbjct: 6   FGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPVESEMLVVIEGVNVTH 65

Query: 230 SIKQNV-CNLELINSVPEISLKIYKMHSLESYVXXXXXXXXXXXXXXXHLLEKYITNSKK 406
                +  + + + ++P  +  ++  HS +  +                LL  Y+  +KK
Sbjct: 66  FASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAIINEDLTSSGEVA-ELLLPYVKLAKK 124

Query: 407 VISMITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVCLR 586
           VI++  KP VE+ + ++      I  +         +++   LE PN I+G++AGV   R
Sbjct: 125 VITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQKDITE---LEAPNFIAGVAAGVASWR 181

Query: 587 EHLDLSALALVFYTE 631
           + ++L   + V YT+
Sbjct: 182 DQMELPVTSFVIYTD 196


>AY061209-1|AAL28757.1|  538|Drosophila melanogaster LD15705p
           protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 18/74 (24%), Positives = 36/74 (48%)
 Frame = +2

Query: 98  TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 277
           T+ + W  +  S D + N+Q +    +P+ ++        ++  S++QN  NL   N   
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410

Query: 278 EISLKIYKMHSLES 319
            + L++ K+HS  S
Sbjct: 411 RLLLQVEKLHSRHS 424


>AE014297-3719|AAZ52545.1|  538|Drosophila melanogaster CG33095-PB,
           isoform B protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 18/74 (24%), Positives = 36/74 (48%)
 Frame = +2

Query: 98  TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 277
           T+ + W  +  S D + N+Q +    +P+ ++        ++  S++QN  NL   N   
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410

Query: 278 EISLKIYKMHSLES 319
            + L++ K+HS  S
Sbjct: 411 RLLLQVEKLHSRHS 424


>AE014297-3718|AAF56400.2|  538|Drosophila melanogaster CG33095-PA,
           isoform A protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 18/74 (24%), Positives = 36/74 (48%)
 Frame = +2

Query: 98  TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 277
           T+ + W  +  S D + N+Q +    +P+ ++        ++  S++QN  NL   N   
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410

Query: 278 EISLKIYKMHSLES 319
            + L++ K+HS  S
Sbjct: 411 RLLLQVEKLHSRHS 424


>BT001868-1|AAN71638.1|  538|Drosophila melanogaster SD03344p
           protein.
          Length = 538

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 18/74 (24%), Positives = 35/74 (47%)
 Frame = +2

Query: 98  TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 277
           T+ + W  +  S D + N+Q +    +P+ ++        ++  S++QN  NL   N   
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410

Query: 278 EISLKIYKMHSLES 319
              L++ K+HS  S
Sbjct: 411 RSLLQVEKLHSRHS 424


>AY051573-1|AAK92997.1|  337|Drosophila melanogaster GH21948p
           protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 371 HLLEKYITNSKKVISMITKPLVEYATSEVCHEECVIRRLSTKNCKN 508
           HL+   + N  +V S + +  V+Y+   +   ECV+  +  +NC+N
Sbjct: 160 HLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRN 205


>AE014134-2637|AAF53483.1|  337|Drosophila melanogaster CG3793-PA
           protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 371 HLLEKYITNSKKVISMITKPLVEYATSEVCHEECVIRRLSTKNCKN 508
           HL+   + N  +V S + +  V+Y+   +   ECV+  +  +NC+N
Sbjct: 160 HLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRN 205


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 78  ISPKLFIFPTITNPLLFYG 22
           IS K+ IF TI NP+L YG
Sbjct: 813 ISNKIIIFKTIFNPILMYG 831


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 78  ISPKLFIFPTITNPLLFYG 22
           IS K+ IF TI NP+L YG
Sbjct: 761 ISNKIIIFKTIFNPILMYG 779


>AE014297-4165|AAN14124.1|  424|Drosophila melanogaster CG31055-PB,
           isoform B protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 431 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 604
           ++E ATS+  H++C+  ++ T +  C NS+ S+ P  +Q    + I+ G      HLD S
Sbjct: 99  VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 153

Query: 605 A 607
           A
Sbjct: 154 A 154


>AE014297-4164|AAN14123.1|  436|Drosophila melanogaster CG31055-PC,
           isoform C protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 431 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 604
           ++E ATS+  H++C+  ++ T +  C NS+ S+ P  +Q    + I+ G      HLD S
Sbjct: 111 VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 165

Query: 605 A 607
           A
Sbjct: 166 A 166


>AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-PA,
           isoform A protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 431 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 604
           ++E ATS+  H++C+  ++ T +  C NS+ S+ P  +Q    + I+ G      HLD S
Sbjct: 90  VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 144

Query: 605 A 607
           A
Sbjct: 145 A 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,077,471
Number of Sequences: 53049
Number of extensions: 627016
Number of successful extensions: 1458
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)