Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d22
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...   141   2e-35
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.6  

>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score =  141 bits (341), Expect = 2e-35
 Identities = 58/89 (65%), Positives = 73/89 (82%)
 Frame = +3

Query: 252 FFGKTCGFIGYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLR 431
           F  K  G  GY +QY CITHCTFEY+GDFV+C GPSMEPTL +NN+L+T+ I+PRL KL+
Sbjct: 4   FLSKALGICGYIVQYGCITHCTFEYLGDFVVCVGPSMEPTLMTNNVLITDRITPRLAKLQ 63

Query: 432 RGDIIIAKSPSNPRQNICKRIKGLPGDKV 518
           RGDIII KSP+ P Q++CKRI G+PGD++
Sbjct: 64  RGDIIITKSPTKPVQHVCKRIIGMPGDRI 92



 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = +3

Query: 546 VVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 641
           +VPRGH+W+EGDN  NS+DSR YGPVP GL++
Sbjct: 199 IVPRGHLWIEGDNVQNSSDSRNYGPVPIGLVK 230


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 453  KSPSNPRQNICKRIKGL-PGDKVRGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPA 629
            K  S+   N  KR K + PG+K     P  +   P       G   + +A S   GPVPA
Sbjct: 975  KKSSHSGTNSSKRKKTVSPGEKKDRGGPMAAGGPPSATAISYGLTMAGAAGSVSNGPVPA 1034

Query: 630  GL 635
             L
Sbjct: 1035 SL 1036


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,958
Number of Sequences: 2352
Number of extensions: 13303
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)