Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d22
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81475-6|CAB03913.2|  132|Caenorhabditis elegans Hypothetical pr...    91   8e-19
AC024826-5|AAF60800.1|  152|Caenorhabditis elegans Hypothetical ...    61   6e-10
AC199169-1|ABO33259.1|  450|Caenorhabditis elegans Hypothetical ...    31   0.53 
U00058-6|AAA50729.2|  189|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF077542-11|AAC26296.1|  137|Caenorhabditis elegans Hypothetical...    28   6.5  
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine rece...    27   8.6  

>Z81475-6|CAB03913.2|  132|Caenorhabditis elegans Hypothetical
           protein C24H11.6 protein.
          Length = 132

 Score = 90.6 bits (215), Expect = 8e-19
 Identities = 43/101 (42%), Positives = 62/101 (61%)
 Frame = +3

Query: 339 VMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDKV 518
           V+CSGPSM PT+   +++L E  S R + ++ GDI+   +P  P++ +CKRI    GD V
Sbjct: 2   VICSGPSMHPTIHDGDLVLAERFSIRNKNVQVGDIVGCVNPQKPKELLCKRIAAKEGDPV 61

Query: 519 RGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 641
             +     + VP GHV+L GDN   S DSR +GPVP  L++
Sbjct: 62  TSHLLPSGR-VPIGHVFLRGDNGPVSTDSRHFGPVPEALVQ 101


>AC024826-5|AAF60800.1|  152|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.8 protein.
          Length = 152

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = +3

Query: 300 CITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEH----ISP-RLQKLRRGDIIIAKSPS 464
           C+    F+ +G      G SM+PTL+  +    +     +S   L K   G I+   SP 
Sbjct: 15  CVVFTFFDVVGHPAQVVGNSMQPTLQGGDARWYKRDIVWLSTWNLYKCSPGTILTFVSPR 74

Query: 465 NPRQNICKRIKGLPGDKVRGNF-PKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 641
           +P     KR+  +    VR    P+    +P+GH W+EGDN  +  DS +YGPV   L++
Sbjct: 75  DPDAVHIKRVTAVENAIVRPEKRPELITDIPKGHYWMEGDNPEHRHDSNVYGPVSTSLVK 134


>AC199169-1|ABO33259.1|  450|Caenorhabditis elegans Hypothetical
           protein F38A1.8 protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +3

Query: 357 SMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRGNFPK 536
           SM   L     L  E ++P ++K+R  ++I+    S P + IC+ +      KV  NF +
Sbjct: 316 SMIKGLVGEKKLSAEDLNPLIEKMRE-NLILKNVASEPAEKICQSVVSKLEGKVVNNFSR 374

Query: 537 RSQVV 551
            +Q V
Sbjct: 375 VAQEV 379


>U00058-6|AAA50729.2|  189|Caenorhabditis elegans Hypothetical
           protein W03A5.5 protein.
          Length = 189

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -2

Query: 400 SVNRMLFDSSVGSIDGPEHMTKSPIYSNVQCVIQAYCKA*PMKPQVLP 257
           S N +   ++  S D PE +T++P Y  + C +  Y K+ P K  + P
Sbjct: 85  SENDLSAGAAGASTDFPE-VTRTPSYLRISCALNGYTKS-PNKSDLTP 130


>AF077542-11|AAC26296.1|  137|Caenorhabditis elegans Hypothetical
           protein Y57G7A.1 protein.
          Length = 137

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 406 MCSVNRMLFDSSVGSIDGPEHMTKS 332
           +CSV+  LFD+ +GS +   + TKS
Sbjct: 113 LCSVHTSLFDNDLGSAESEVYCTKS 137


>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical protein
            ZK970.6 protein.
          Length = 1122

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +3

Query: 270  GFIGYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIII 449
            G +G ++   C+   T            PSM    E+ + LLT+H   + +   RG++II
Sbjct: 995  GVVGLSMPRYCLFGDTVNTASRMESNGKPSMIHMSEAAHSLLTDHYPHQYETSSRGEVII 1054


>U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 13 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 243 FMNFFGKTCGFIGYALQYACITHCTFEYIGDF 338
           F + FG T  ++GY+L   C +H  +  +  F
Sbjct: 80  FCHHFGPTTCYVGYSLMLHCFSHSLWSLLLSF 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,695,243
Number of Sequences: 27780
Number of extensions: 312160
Number of successful extensions: 663
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)