Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26d17
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457398-1|CAG33679.1| 309|Homo sapiens DKFZP566F0546 protein. 91 5e-18
CR456438-1|CAG30324.1| 309|Homo sapiens dJ102D24.2 protein. 91 5e-18
BC009904-1|AAH09904.1| 309|Homo sapiens RIB43A domain with coil... 91 5e-18
BC003024-1|AAH03024.1| 309|Homo sapiens RIB43A domain with coil... 91 5e-18
AL442116-1|CAC09526.1| 309|Homo sapiens hypothetical protein pr... 91 5e-18
AL021391-2|CAI18929.1| 309|Homo sapiens protein ( Human DNA seq... 91 5e-18
Z97054-6|CAI42650.1| 379|Homo sapiens RIB43A domain with coiled... 73 1e-12
BC036767-1|AAH36767.1| 379|Homo sapiens RIB43A domain with coil... 73 1e-12
Z97054-5|CAI42649.1| 192|Homo sapiens RIB43A domain with coiled... 66 1e-10
Z97054-4|CAI42648.1| 181|Homo sapiens RIB43A domain with coiled... 66 1e-10
AK057345-1|BAB71438.1| 192|Homo sapiens protein ( Homo sapiens ... 66 1e-10
Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)... 34 0.48
Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)... 34 0.48
Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)... 34 0.48
Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)... 34 0.48
DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding p... 34 0.48
BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein. 34 0.48
BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisia... 34 0.48
AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC... 34 0.48
AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b var... 34 0.48
AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens ... 34 0.48
AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein. 34 0.48
AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein. 34 0.48
AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding p... 34 0.48
AJ011021-1|CAB56834.1| 466|Homo sapiens cardiac potassium chann... 33 1.5
BC125079-1|AAI25080.1| 380|Homo sapiens triggering receptor exp... 31 3.4
BC125078-1|AAI25079.1| 380|Homo sapiens triggering receptor exp... 31 3.4
AY358171-1|AAQ88538.1| 321|Homo sapiens APAF6268 protein. 31 3.4
AL391903-1|CAI19858.1| 380|Homo sapiens triggering receptor exp... 31 3.4
AL133404-1|CAI19909.1| 380|Homo sapiens triggering receptor exp... 31 3.4
AK023755-1|BAB14668.1| 380|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF534824-1|AAO15022.1| 321|Homo sapiens TREM-like transcript 2 ... 31 3.4
X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein. 30 7.9
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 30 7.9
U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein. 30 7.9
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 30 7.9
D63808-1|BAA23631.1| 76|Homo sapiens DRPLA protein. 30 7.9
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 30 7.9
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 30 7.9
BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein. 30 7.9
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 30 7.9
AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein. 30 7.9
>CR457398-1|CAG33679.1| 309|Homo sapiens DKFZP566F0546 protein.
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>CR456438-1|CAG30324.1| 309|Homo sapiens dJ102D24.2 protein.
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>BC009904-1|AAH09904.1| 309|Homo sapiens RIB43A domain with
coiled-coils 2 protein.
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>BC003024-1|AAH03024.1| 309|Homo sapiens RIB43A domain with
coiled-coils 2 protein.
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>AL442116-1|CAC09526.1| 309|Homo sapiens hypothetical protein
protein.
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>AL021391-2|CAI18929.1| 309|Homo sapiens protein ( Human DNA
sequence from clone RP1-102D24 on chromosome 22. ).
Length = 309
Score = 90.6 bits (215), Expect = 5e-18
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 323 MIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASD 502
M ++ + +LE R++ +R+ + I+ ++Q++Q+ E RREFDL+DP LKK LP R SD
Sbjct: 1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSD 60
Query: 503 GDPVG-MSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXXXYMMAI 679
D +S QKF GEDLN+ ERKK Q W QQ + Y
Sbjct: 61 NDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETR 120
Query: 680 KARDLRASELDKLERECR 733
D A L KLE R
Sbjct: 121 LQFDETAKHLQKLESTTR 138
>Z97054-6|CAI42650.1| 379|Homo sapiens RIB43A domain with
coiled-coils 1 protein.
Length = 379
Score = 72.5 bits (170), Expect = 1e-12
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 1/204 (0%)
Frame = +2
Query: 125 IANEQDRKEAXXXXXXXXXXXXXXXXIFNARNRKIGVDVPFLXXXXXXXXXXXXXXXXXX 304
I D KEA FN RNR +GVDV L
Sbjct: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
Query: 305 LAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQL 484
A+ ++ + +LE + + R++ ++ ++R+ Q+ ++ REF L DP + K L
Sbjct: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
Query: 485 PPRASDGDPV-GMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXX 661
P S + G +S Q F GEDL+ + R ++ Q LE+Q Q
Sbjct: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTDA 183
Query: 662 XYMMAIKARDLRASELDKLERECR 733
A D +A+ L +LE CR
Sbjct: 184 LSNQLRLAMDAQATHLARLEESCR 207
>BC036767-1|AAH36767.1| 379|Homo sapiens RIB43A domain with
coiled-coils 1 protein.
Length = 379
Score = 72.5 bits (170), Expect = 1e-12
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 1/204 (0%)
Frame = +2
Query: 125 IANEQDRKEAXXXXXXXXXXXXXXXXIFNARNRKIGVDVPFLXXXXXXXXXXXXXXXXXX 304
I D KEA FN RNR +GVDV L
Sbjct: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
Query: 305 LAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQL 484
A+ ++ + +LE + + R++ ++ ++R+ Q+ ++ REF L DP + K L
Sbjct: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
Query: 485 PPRASDGDPV-GMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQXXXXXXXXXXXXXX 661
P S + G +S Q F GEDL+ + R ++ Q LE+Q Q
Sbjct: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTDA 183
Query: 662 XYMMAIKARDLRASELDKLERECR 733
A D +A+ L +LE CR
Sbjct: 184 LSNQLRLAMDAQATHLARLEESCR 207
>Z97054-5|CAI42649.1| 192|Homo sapiens RIB43A domain with
coiled-coils 1 protein.
Length = 192
Score = 66.1 bits (154), Expect = 1e-10
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = +2
Query: 125 IANEQDRKEAXXXXXXXXXXXXXXXXIFNARNRKIGVDVPFLXXXXXXXXXXXXXXXXXX 304
I D KEA FN RNR +GVDV L
Sbjct: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
Query: 305 LAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQL 484
A+ ++ + +LE + + R++ ++ ++R+ Q+ ++ REF L DP + K L
Sbjct: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
Query: 485 PPRASDGDPV-GMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQ 619
P S + G +S Q F GEDL+ + R ++ Q LE+Q Q
Sbjct: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQ 169
>Z97054-4|CAI42648.1| 181|Homo sapiens RIB43A domain with
coiled-coils 1 protein.
Length = 181
Score = 66.1 bits (154), Expect = 1e-10
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = +2
Query: 125 IANEQDRKEAXXXXXXXXXXXXXXXXIFNARNRKIGVDVPFLXXXXXXXXXXXXXXXXXX 304
I D KEA FN RNR +GVDV L
Sbjct: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
Query: 305 LAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQL 484
A+ ++ + +LE + + R++ ++ ++R+ Q+ ++ REF L DP + K L
Sbjct: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
Query: 485 PPRASDGDPV-GMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQ 619
P S + G +S Q F GEDL+ + R ++ Q LE+Q Q
Sbjct: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQ 169
>AK057345-1|BAB71438.1| 192|Homo sapiens protein ( Homo sapiens
cDNA FLJ32783 fis, clone TESTI2002223, weakly similar to
Chlamydomonas reinhardtii strain 1132D- flagellar
protofilament ).
Length = 192
Score = 66.1 bits (154), Expect = 1e-10
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = +2
Query: 125 IANEQDRKEAXXXXXXXXXXXXXXXXIFNARNRKIGVDVPFLXXXXXXXXXXXXXXXXXX 304
I D KEA FN RNR +GVDV L
Sbjct: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
Query: 305 LAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQL 484
A+ ++ + +LE + + R++ ++ ++R+ Q+ ++ REF L DP + K L
Sbjct: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
Query: 485 PPRASDGDPV-GMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQ 619
P S + G +S Q F GEDL+ + R ++ Q LE+Q Q
Sbjct: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQ 169
>Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 272
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 185 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 242
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 243 RDRHRRHRSRSRSHSRGHRR 262
>Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 170
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 37 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 94
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 95 RDRHRRHRSRSRSHSRGHRR 114
>DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding
protein Luc7-like 1 protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein.
Length = 354
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 221 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 278
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 279 RDRHRRHRSRSRSHSRGHRR 298
>BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC7B1
protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b
variant protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ10231 fis, clone HEMBB1000226, weakly similar to
PUTATIVE PRE-MRNA SPLICING FACTOR ATP-DEPENDENT RNA
HELICASE ).
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding
protein protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.48
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 538 RR*RFKLRRTEEADGGPEERLARTAGPRTEGRRG------RTQKSRSSIYDGNKSSRPKS 699
+R + +LRR EE + EERL+R +G RT RR R ++SRS+ + K SR +S
Sbjct: 238 KRNQDRLRRREERER--EERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRS 295
Query: 700 Q*A*QAXARMSLQTRAGHLR 759
+ + S GH R
Sbjct: 296 RDRHRRHRSRSRSHSRGHRR 315
>AJ011021-1|CAB56834.1| 466|Homo sapiens cardiac potassium channel
subunit (Kv6.2) protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 535 IRR*RFKLRRTEEADGGPEERLARTAGPRTEGRRGRTQKSRSSIYD 672
+RR R + EA GP ER A+ + R G RGR Q+ R + D
Sbjct: 120 LRRLRRREEEAAEARAGPTERGAQGSPARALGPRGRLQRGRRRLRD 165
>BC125079-1|AAI25080.1| 380|Homo sapiens triggering receptor
expressed on myeloid cells-like 2 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 235 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 294
Query: 436 STR 444
STR
Sbjct: 295 STR 297
>BC125078-1|AAI25079.1| 380|Homo sapiens triggering receptor
expressed on myeloid cells-like 2 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 235 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 294
Query: 436 STR 444
STR
Sbjct: 295 STR 297
>AY358171-1|AAQ88538.1| 321|Homo sapiens APAF6268 protein.
Length = 321
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 176 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 235
Query: 436 STR 444
STR
Sbjct: 236 STR 238
>AL391903-1|CAI19858.1| 380|Homo sapiens triggering receptor
expressed on myeloid cells-like 2 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 235 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 294
Query: 436 STR 444
STR
Sbjct: 295 STR 297
>AL133404-1|CAI19909.1| 380|Homo sapiens triggering receptor
expressed on myeloid cells-like 2 protein.
Length = 380
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 235 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 294
Query: 436 STR 444
STR
Sbjct: 295 STR 297
>AK023755-1|BAB14668.1| 380|Homo sapiens protein ( Homo sapiens
cDNA FLJ13693 fis, clone PLACE2000111. ).
Length = 380
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 235 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 294
Query: 436 STR 444
STR
Sbjct: 295 STR 297
>AF534824-1|AAO15022.1| 321|Homo sapiens TREM-like transcript 2
protein.
Length = 321
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 PREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSELPTNRG-- 435
PR TR A+KTG AT Q P R + SQT + S + P + T G
Sbjct: 176 PRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDL 235
Query: 436 STR 444
STR
Sbjct: 236 STR 238
>X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KNGRS*WRPRRTPGSNSRSKNGRAPRKNAKKPKQ 662
+ GRS R RRTP SRSK+ R R++++ ++
Sbjct: 600 RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSER 633
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein.
Length = 754
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KNGRS*WRPRRTPGSNSRSKNGRAPRKNAKKPKQ 662
+ GRS R RRTP SRSK+ R R++++ ++
Sbjct: 600 RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSER 633
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>D63808-1|BAA23631.1| 76|Homo sapiens DRPLA protein.
Length = 76
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein.
Length = 739
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KNGRS*WRPRRTPGSNSRSKNGRAPRKNAKKPKQ 662
+ GRS R RRTP SRSK+ R R++++ ++
Sbjct: 585 RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSER 618
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 253 ASGPREEIRTRGAAKTGAGLRATDDQRQ*PGRGLRSQTERRTSSYRLGNRQVPSE 417
A GPREE+R+RG A G ++ D + R + +S N+Q SE
Sbjct: 20 APGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSE 74
>AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KNGRS*WRPRRTPGSNSRSKNGRAPRKNAKKPKQ 662
+ GRS R RRTP SRSK+ R R++++ ++
Sbjct: 417 RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSER 450
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,593,124
Number of Sequences: 237096
Number of extensions: 1830549
Number of successful extensions: 6295
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6272
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -