Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26d17
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 31 0.67
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 30 2.1
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 29 2.7
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 2.7
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 2.7
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 2.7
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 2.7
Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 29 4.7
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 29 4.7
AC006617-6|AAF39769.1| 303|Caenorhabditis elegans Hypothetical ... 29 4.7
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 28 6.3
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 8.3
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 8.3
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 8.3
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 31.5 bits (68), Expect = 0.67
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +2
Query: 320 QMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRAS 499
+M + + A E R REE+ I LE K Q Y+R + R+E LKK+L R +
Sbjct: 245 KMTRKRMMRAKHEKRLREEQ--IALEESKKEQIYERKKQRKE-------KLKKELDRRPN 295
Query: 500 DGDPVGMSSAQKFEGEDLNYEERKK 574
DG + E ED +++ R+K
Sbjct: 296 DG-------VLQLETEDFDWKPRRK 313
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 314 AQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFD 451
A++ I+ + A LEAR+REE R+ E ++ + + + E D
Sbjct: 633 AEEKIRRDRVRAELEAREREEERKRAAERERIARETASLQQQAELD 678
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 582 RPRRTPGSNSRSKNGRAPRKNAKKP 656
RPR P + S GRAPR++ + P
Sbjct: 645 RPRNAPAHHGASNGGRAPREDERSP 669
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 582 RPRRTPGSNSRSKNGRAPRKNAKKP 656
RPR P + S GRAPR++ + P
Sbjct: 686 RPRNAPAHHGASNGGRAPREDERSP 710
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +2
Query: 356 EARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKK------QLPPRASDGDPVG 517
E + E RRI L +K Q QRT++ E + + D + K Q PP+A+ D G
Sbjct: 9 EEHEAELDRRIALIREKNHQIEQRTKEIEEDRVRNEDSIAKSPKSSSQTPPKATTPDRTG 68
Query: 518 MSSAQKFEGE 547
S + +G+
Sbjct: 69 QWSREWDKGK 78
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 362 RQREERRRIGLE-IDKYRQNYQRTED-RREFDLNDPDVLKKQLPPRASDGDPVGMSSAQK 535
R R E+++I +E ID R+ +R E+ RREF+L + KK+ R + ++
Sbjct: 542 RIRLEQQKIDMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREE 601
Query: 536 FEGEDLNYEERKKLMAAQKNAWLEQQ 613
E + E+++ +AA+K Q+
Sbjct: 602 EERREKERREQERRIAAEKERKRRQE 627
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 362 RQREERRRIGLE-IDKYRQNYQRTED-RREFDLNDPDVLKKQLPPRASDGDPVGMSSAQK 535
R R E+++I +E ID R+ +R E+ RREF+L + KK+ R + ++
Sbjct: 542 RIRLEQQKIDMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREE 601
Query: 536 FEGEDLNYEERKKLMAAQKNAWLEQQ 613
E + E+++ +AA+K Q+
Sbjct: 602 EERREKERREQERRIAAEKERKRRQE 627
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 362 RQREERRRIGLE-IDKYRQNYQRTED-RREFDLNDPDVLKKQLPPRASDGDPVGMSSAQK 535
R R E+++I +E ID R+ +R E+ RREF+L + KK+ R + ++
Sbjct: 542 RIRLEQQKIDMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREE 601
Query: 536 FEGEDLNYEERKKLMAAQKNAWLEQQ 613
E + E+++ +AA+K Q+
Sbjct: 602 EERREKERREQERRIAAEKERKRRQE 627
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 362 RQREERRRIGLE-IDKYRQNYQRTED-RREFDLNDPDVLKKQLPPRASDGDPVGMSSAQK 535
R R E+++I +E ID R+ +R E+ RREF+L + KK+ R + ++
Sbjct: 542 RIRLEQQKIDMERIDAERRERERKEEERREFELIEAARRKKEARDRDRLDEMERERVREE 601
Query: 536 FEGEDLNYEERKKLMAAQKNAWLEQQ 613
E + E+++ +AA+K Q+
Sbjct: 602 EERREKERREQERRIAAEKERKRRQE 627
>Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical
protein C55A1.5 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 395 EIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASDG 505
E+D Y NY R E +D+N V K L DG
Sbjct: 168 EMDDYTDNYMRNEMWERYDINISQVAKMALVAYNDDG 204
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 428 TEDRREFDLNDPDVLKKQLPPRASDGDPVGMSSAQKFEGEDLNYEERKKLMAAQKNAWLE 607
T + D+ D V+K++ P D + ++ + ED +E KKL+ +KN E
Sbjct: 2 TSPSSDEDIIDIRVIKEE-PESEPDSEAEPATTTNSTDSEDSVEQENKKLLETEKNRKRE 60
Query: 608 QQ 613
Q+
Sbjct: 61 QK 62
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 428 TEDRREFDLNDPDVLKKQLPPRASDGDPVGMSSAQKFEGEDLNYEERKKLMAAQKNAWLE 607
T + D+ D V+K++ P D + ++ + ED +E KKL+ +KN E
Sbjct: 2 TSPSSDEDIIDIRVIKEE-PESEPDSEAEPATTTNSTDSEDSVEQENKKLLETEKNRKRE 60
Query: 608 QQ 613
Q+
Sbjct: 61 QK 62
>AC006617-6|AAF39769.1| 303|Caenorhabditis elegans Hypothetical
protein C39B5.4 protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 451 VKLASILGSLVILTVLVYFQADTTTFFSLSG 359
VK+ +++G ILT+L YF A+T F L G
Sbjct: 150 VKVLTLIGLKDILTMLPYFDAETLENFQLWG 180
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 565 TEEADGGPEERLARTAGPRTEGRRGRTQKSRSSIYDGNKSS 687
TE+A E++ GPRT RRG + K RS+ +K+S
Sbjct: 658 TEDATEAKNEKITTPRGPRTL-RRGESVKDRSAYTAVHKAS 697
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 350 VLEARQREERRRIGLEIDKYRQNYQRTED----RREFDLNDPDVLKKQLPPRASDGDPVG 517
+LE R+ ++R E KY+Q +R ++ R +N P ++K P + G
Sbjct: 745 ILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIRPGQVYTSPSAG 804
Query: 518 MS 523
MS
Sbjct: 805 MS 806
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 350 VLEARQREERRRIGLEIDKYRQNYQRTED----RREFDLNDPDVLKKQLPPRASDGDPVG 517
+LE R+ ++R E KY+Q +R ++ R +N P ++K P + G
Sbjct: 745 ILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIRPGQVYTSPSAG 804
Query: 518 MS 523
MS
Sbjct: 805 MS 806
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 350 VLEARQREERRRIGLEIDKYRQNYQRTED----RREFDLNDPDVLKKQLPPRASDGDPVG 517
+LE R+ ++R E KY+Q +R ++ R +N P ++K P + G
Sbjct: 745 ILETALRDSKQRSQAERKKYQQEVERIKEAVRQRNMRRMNAPQIVKPIRPGQVYTSPSAG 804
Query: 518 MS 523
MS
Sbjct: 805 MS 806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,751,045
Number of Sequences: 27780
Number of extensions: 276361
Number of successful extensions: 1090
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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