Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d17
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    24   1.8  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    24   1.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   5.4  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   5.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   5.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +2

Query: 488 PRASDGDPVGMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQ 619
           P     +PVG      +  + +        +  Q N+W +QQVQ
Sbjct: 730 PNTQIQNPVGQGQDMTYSVQGVGVVNAGGWLGQQGNSWSQQQVQ 773


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 184 FTLSPPLSILCFFSVLFVGYL*FQHFFLL 98
           F +SPP+ I C++    +G L  Q + +L
Sbjct: 103 FCMSPPMVINCYYETWVLGPLFCQIYAML 131


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 184 FTLSPPLSILCFFSVLFVGYL*FQHFFLL 98
           F +SPP+ I C++    +G L  Q + +L
Sbjct: 69  FCMSPPMVINCYYETWVLGPLFCQIYAML 97


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 199 ISPF*FTLSPPLSILC 152
           I+PF   +SP LS+LC
Sbjct: 54  INPFFCDMSPSLSLLC 69


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 31  RERTSRRRYSRSREREQKSYKNEREYREY 59


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 279 RERTSRRRYSRSREREQKSYKNEREYREY 307


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 362 RQREERRRIGLEIDKYRQNYQRTEDRREF 448
           R+R  RRR     ++ +++Y+   + RE+
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREY 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,049
Number of Sequences: 438
Number of extensions: 3916
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)