Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d15
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    35   0.054
02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225...    34   0.094
05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536...    29   3.5  
07_03_1655 - 28421203-28421556                                         28   8.2  

>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +2

Query: 521  DRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALND---TEPGRLLQYTCKA 691
            DRFIP RS  + D+ HY+L+      E    + A EA  + L +       R+L +  K 
Sbjct: 2951 DRFIPDRSAMDMDMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRILSFRNKP 3010

Query: 692  P 694
            P
Sbjct: 3011 P 3011


>02_05_0420 +
           28821717-28821854,28821944-28822210,28822299-28822568,
           28822656-28823246,28823336-28823479
          Length = 469

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = +2

Query: 497 ASKTPNK---ADRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALND---TE 658
           AS+ P+     DRFIP RS  + D+ HY+L+      E    + + E   R L +     
Sbjct: 37  ASRNPSAKCYGDRFIPDRSAMDMDMAHYLLTEPKKDKENAAASPSKEVYRRLLAEKLLNN 96

Query: 659 PGRLLQYTCKAP 694
             R+L +  K P
Sbjct: 97  RTRILAFRNKPP 108


>05_01_0599 +
           5368091-5368123,5368212-5368383,5369237-5369335,
           5369636-5369748,5369824-5369916,5370081-5370244,
           5370328-5370564,5370739-5370883,5370982-5371160,
           5371997-5372142,5372239-5372366,5372441-5372614,
           5372706-5372735,5373219-5373380,5373460-5373705,
           5373733-5373870,5373974-5374174,5374304-5374448,
           5374575-5374681,5374830-5374970,5375274-5375539,
           5375621-5375745,5375843-5376109,5376250-5376263
          Length = 1174

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 152 EFRCIMSQFNYLNEINSLATMDGPITRGPLQRWAKKGCNENINPSLSN 295
           +++CI+S     N +  L  MDG      L+  AKK   E I P+  N
Sbjct: 504 DWKCIISMLLDENPLTELTDMDGTNLVRMLRASAKKAVGERIVPATDN 551


>07_03_1655 - 28421203-28421556
          Length = 117

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 699 AAGALQVYWRRRPGSVSFRALPIASPAA 616
           AA  L V W ++P   SF+ +P A PAA
Sbjct: 11  AARPLSVAWLKKPLCASFQPVPRARPAA 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,735
Number of Sequences: 37544
Number of extensions: 274788
Number of successful extensions: 709
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)