Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d12
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z78013-6|CAB01421.1|  205|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = +1

Query: 274 HSHRNNVKMTNQIRIAKRIYTLLVR------VKEQVKIWVLQKVVEISFE 405
           H H NN+   N+ ++ +  +T+ +R        E++K ++ +KV +ISF+
Sbjct: 31  HHHYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGEKVGKISFD 80


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = +1

Query: 274 HSHRNNVKMTNQIRIAKRIYTLLVR------VKEQVKIWVLQKVVEISFE 405
           H H NN+   N+ ++ +  +T+ +R        E++K ++ +KV +ISF+
Sbjct: 31  HHHYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGEKVGKISFD 80


>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 396 NFDDFLQHPYFYLLFNSYQ*SIDSFGDPYLIRHFHVVPVT-VHYGL*IFQCPVLFSGH 226
           +F D+L +PY  + +N+ + S+D      L+    +V  T +H+       P  F  H
Sbjct: 296 HFMDYLNNPYIKVFYNAEENSLDEESVQCLLADIPIVEFTYIHFQSAEQNAPTCFEQH 353


>Z78013-6|CAB01421.1|  205|Caenorhabditis elegans Hypothetical
           protein F15B9.2 protein.
          Length = 205

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +1

Query: 199 RSLLKSRSHMSRKQNGTLKDL*AVMHSHRNNVKMTNQIRI 318
           R L+++ S++S+K    LKD+     ++RN  +M N +++
Sbjct: 38  RELVEAYSNLSQKDQPDLKDVFRNHQNYRNEQEMVNALKM 77


>Z68117-4|CAA92180.1|  589|Caenorhabditis elegans Hypothetical
           protein F45E6.2 protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 414 NSVFETNFDDFLQHPYF 364
           N+V E+NFDD L +P F
Sbjct: 5   NTVHESNFDDLLHNPNF 21


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,729,030
Number of Sequences: 27780
Number of extensions: 187112
Number of successful extensions: 393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)