Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d11
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.56 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.3  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    24   5.2  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   6.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.1  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +2

Query: 443  GACRAGCSHSRL--KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTRTRWSAGSA 607
            G   AG    RL  +  ++CH    A  GA R+      R GT + W R  W A +A
Sbjct: 837  GVALAGLVPFRLLVREDARCHRRLLAAPGASRKDIRLEERQGTFQEWQRA-WDAAAA 892


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
 Frame = +2

Query: 356  GSRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRR 535
            GSR       +  +     S  G     R   R+G   SR +  S+        R +  R
Sbjct: 1088 GSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSR 1147

Query: 536  RWSRTGRP---GTCRSWTRTRWSAGS 604
              SR+G     G+ RS +R+R  +GS
Sbjct: 1148 SRSRSGSQASRGSRRSRSRSRSRSGS 1173


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 512 PPPSNDTLRFFLNDCASIQPGMPPG 438
           PPP       F  D A   PGMPPG
Sbjct: 164 PPPIAHQQAPFAMDPARPNPGMPPG 188


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 365 CETQDVTTACGTGCSTNSKRITK*RASSGNSR 270
           C+T+DVT  C  G +T  +  T  R    N +
Sbjct: 69  CKTKDVTICCPDGVTTVDRNPTAVRDGLPNPK 100


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = +2

Query: 374 PKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWS 544
           P+ ++  A+  +S+P   R      C   CS S   R S   C   A   +C  R S
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVPCS-SIWSRPSSMRC-APARTASCSTRSS 91


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = -2

Query: 663 DGVGADALGLRAAHHVVQHALPALQRVRVQERHVPGLPVRLQRRRH 526
           DG G    G R  HH+ +HA   L    V       LP     + H
Sbjct: 463 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLH 508


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = -2

Query: 663 DGVGADALGLRAAHHVVQHALPALQRVRVQERHVPGLPVRLQRRRH 526
           DG G    G R  HH+ +HA   L    V       LP     + H
Sbjct: 439 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLH 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,487
Number of Sequences: 2352
Number of extensions: 13794
Number of successful extensions: 61
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)