Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d09
         (576 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RMT3 Cluster: Chromosome 3 SCAF15018, whole genome sh...    33   3.6  
UniRef50_Q869H2 Cluster: Voltage-dependent non-L-type calcium ch...    33   3.6  
UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q8RVT1 Cluster: MutS homolog 7; n=6; Magnoliophyta|Rep:...    33   6.4  
UniRef50_A5CM60 Cluster: Putative 4-phosphopantetheinyl transfer...    32   8.4  
UniRef50_A7PER8 Cluster: Chromosome chr11 scaffold_13, whole gen...    32   8.4  

>UniRef50_Q4RMT3 Cluster: Chromosome 3 SCAF15018, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 3 SCAF15018, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 291

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +1

Query: 313 MLICMTCFTALVAAGCIACGPIVLDTYWP-IKKSKEKKNSSPVCKSPC--CPKRSGAK*F 483
           ML+C+ C++   +A C  C    L T  P  KK + K NS       C  C +  G + F
Sbjct: 86  MLMCVECYSNEYSAKCHTC----LKTIMPGSKKMEHKGNSWHENCFACNRCQQPIGTRNF 141

Query: 484 SQRNT*NLCLICILSVILNGVCF 552
            Q++  N CL C         C+
Sbjct: 142 VQKDANNYCLPCYEKQFAQKCCY 164


>UniRef50_Q869H2 Cluster: Voltage-dependent non-L-type calcium channel
            alpha-1 subunit isoform A; n=3; Bilateria|Rep:
            Voltage-dependent non-L-type calcium channel alpha-1
            subunit isoform A - Lymnaea stagnalis (Great pond snail)
          Length = 2141

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 99   PRELYRLVWNIFDFRFIPIG--ISLLIEQFRRKMICLSLYALIASATLLACVPVCYK-RF 269
            PR  +   WN+FDF  + +G  I +LI +F ++ +    + L  +A L+  +   Y  R 
Sbjct: 1258 PRNYFHDPWNVFDFTTV-VGSIIDVLITEFSKRQVSFGFFRLFRAARLVKLLRQGYTIRL 1316

Query: 270  EMQKFLQCIK 299
             +  F Q  K
Sbjct: 1317 LLWTFFQSFK 1326


>UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1;
           Trichoplusia ni ascovirus 2c|Rep: Putative
           uncharacterized protein - Trichoplusia ni ascovirus 2c
          Length = 565

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 322 CMTCFTALVAAGCIACGPIV--LDTYWPIKKSKEKKNSSPVCKSPC 453
           C+ C    ++  C+ CG +   +D    I  S  +K   P CKSPC
Sbjct: 509 CILCKQNYISCCCVPCGHMCFCIDCANKIILSSSEKQQCPYCKSPC 554


>UniRef50_Q8RVT1 Cluster: MutS homolog 7; n=6; Magnoliophyta|Rep: MutS
            homolog 7 - Triticum aestivum (Wheat)
          Length = 1160

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 207  GRGKSSFDGTALLVAKFRLV*NENQKYSRLIDTIHEATIISEFVKCRHIILKILA 43
            GRG S+FDG A+  A FR +    Q   RL+   H   +  EF    H+ L+ +A
Sbjct: 990  GRGTSTFDGYAIAYAVFRHL--VEQVRCRLLFATHYHPLTKEFASHPHVSLQHMA 1042


>UniRef50_A5CM60 Cluster: Putative 4-phosphopantetheinyl
           transferase; n=1; Clavibacter michiganensis subsp.
           michiganensis NCPPB 382|Rep: Putative
           4-phosphopantetheinyl transferase - Clavibacter
           michiganensis subsp. michiganensis (strain NCPPB 382)
          Length = 241

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 411 GLLYGPISVQNYWPARDTARRHERRETGH 325
           GL    I++  +W  R  ARR ERRE GH
Sbjct: 210 GLALAGIALDEHWSRRAGARRDERREDGH 238


>UniRef50_A7PER8 Cluster: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr11 scaffold_13, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 262

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 207 GRGKSSFDGTALLVAKFR-LV*NENQKYSRLIDTIHEATIISEFVKCRHIILKILA 43
           GRG S+FDG A+  A FR LV   N    RL+   H   +  EF    H+ L+ +A
Sbjct: 80  GRGTSTFDGYAIAYAVFRHLVEKVN---CRLLFATHYHPLTKEFASHPHVTLQHMA 132


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,717,098
Number of Sequences: 1657284
Number of extensions: 9886883
Number of successful extensions: 26278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26277
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)