Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26d06
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.71 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    26   0.94 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   3.8  
AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
 Frame = +3

Query: 246 SENEVNTHRITSQEQGVNHVEGGWP-KEINF--------LDEEITSRYRHRV--EREDTY 392
           +EN+ +T  +  Q+Q +  V GG P +  NF        L +EI   Y H +    E   
Sbjct: 232 TENKASTFNMNKQQQRLTGVHGGCPWRPPNFKYGRGIIGLHQEIEQFYAHMIATPTEHAL 291

Query: 393 VEVILNQYENFEHYLKQNNAIEMYEMF 473
             +++++ E     L  +  +EM+  F
Sbjct: 292 RVMVVSRIEKIVQNLWPSARVEMFGSF 318


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 594 WDYLHKTIQYMLLGDYLC-LLRDY 526
           W+ +H  +  M++  YLC LLR Y
Sbjct: 555 WEAIHAALSKMMIPPYLCRLLRSY 578


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
 Frame = +3

Query: 339 DEEIT-SRYRHRVEREDTYVEVILNQYENFEHYLKQNNAIEMYEMFYKKMPPTQLIEKSA 515
           D ++T   Y + V  E  +       Y N    +    AI    + Y   PP  L+ +  
Sbjct: 431 DHQLTFGFYNYPVSFESMFESNRYEHYMNIYGSVMMQGAINNISLAY---PPFSLLTQPE 487

Query: 516 LRINSLLKDTDNRPIAC 566
              +    D DNRP +C
Sbjct: 488 KIRDDTFCDEDNRPDSC 504


>AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450
           CYP4H16 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/20 (55%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
 Frame = +1

Query: 343 RKLHQDIDTVL--NEKTLML 396
           +KL+++IDTVL  N KT++L
Sbjct: 32  QKLYEEIDTVLGENAKTIVL 51


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 564  CIGWSCEDNPKIVVAYCNKKYPI 632
            C GW  +D P  +   CN  + I
Sbjct: 2335 CAGWYKDDIPDAIADTCNSVWTI 2357


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 564  CIGWSCEDNPKIVVAYCNKKYPI 632
            C GW  +D P  +   CN  + I
Sbjct: 2336 CAGWYKDDIPDAIADTCNSVWTI 2358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,431
Number of Sequences: 2352
Number of extensions: 14111
Number of successful extensions: 68
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)