Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c19
         (463 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g28770.1 68416.m03591 expressed protein                             31   0.38 
At3g02930.1 68416.m00288 expressed protein  ; expression support...    31   0.50 
At1g48500.1 68414.m05421 expressed protein ; expression supporte...    31   0.50 
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a...    30   0.88 
At1g19350.3 68414.m02405 brassinosteroid signalling positive reg...    29   1.5  
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote...    28   2.7  
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi...    28   3.5  
At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY...    27   4.7  
At3g52250.1 68416.m05742 myb family transcription factor contain...    27   6.2  

>At3g28770.1 68416.m03591 expressed protein 
          Length = 2081

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 295  KQKEQLEKIRKKLKLNPEISQKEDK*AEKLRQKHTK 402
            K+KE  E   KKLK N E  +K+    E  +QK TK
Sbjct: 1193 KEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETK 1228


>At3g02930.1 68416.m00288 expressed protein  ; expression supported
           by MPSS
          Length = 806

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 298 QKEQLEKIRKKLKLNPEISQKEDK*AEKLRQKHTKIN 408
           QK  LEK  +KL +  E S K +K AEKL+ +   +N
Sbjct: 374 QKVDLEKSEQKLGIAEEESSKSEKEAEKLKNELETVN 410


>At1g48500.1 68414.m05421 expressed protein ; expression supported
           by MPSS
          Length = 285

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 179 LVYQDLEQERAEAAVDLSGN-PAEASANTEQPKKIV 283
           LVYQD+  E+A+A + L+GN P     +  +P+K+V
Sbjct: 132 LVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQKLV 167


>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
           alpha glucosidase II beta subunit from GI:2104691 [Mus
           musculus]
          Length = 647

 Score = 29.9 bits (64), Expect = 0.88
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 298 QKEQLEKIRKKLKLNPEISQKEDK*AEKLRQK 393
           +KEQ+EK+ +K +L  E  +KE K AE   Q+
Sbjct: 196 RKEQIEKVEEKERLQKEKEEKEKKEAELAAQQ 227


>At1g19350.3 68414.m02405 brassinosteroid signalling positive
           regulator, putative similar to BZR1 protein [Arabidopsis
           thaliana] gi|20270971|gb|AAM18490
          Length = 357

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = +2

Query: 176 RLVYQDLEQERAEAAVDLSGNPAEASANTEQPKKIVTFTTNRRSNWKKSERN 331
           R  Y   E+ER + A       ++ + +T          T R+ +W++ E N
Sbjct: 3   RFFYNSSEEERKKKAYSSKKMTSDGATSTSAAAAAAAMATRRKPSWRERENN 54


>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
           contains Pfam profile PF02338: OTU-like cysteine
           protease
          Length = 189

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 295 KQKEQLEKIRKKLKLNPEISQKEDK*AEKLRQKHTKI 405
           K+KE+ EK RK ++   +   KEDK  +K  +K  K+
Sbjct: 132 KKKEEEEKERKDMEKEEKKKDKEDKKKDKEDKKKAKV 168


>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
           histidine kinase AHK2 [Arabidopsis thaliana]
           gi|13537196|dbj|BAB40774
          Length = 1176

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 288 KVTIFLGCSVFAEASAGFPDRSTAASALSCSRSWYTRRSCKPSTQVHIKMIVKVTNSG 115
           K  + LGCS   E  +GFP    A +A    +++ T  S +      IK++V V ++G
Sbjct: 747 KQRLALGCSESGETVSGFP----AVNAWGSWKNFKTCYSTESQNSDQIKLLVTVEDTG 800


>At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY1)
           similar to Ara4-interacting protein [Arabidopsis
           thaliana] GI:13160609; contains Pfam profiles PF00789:
           UBX domain, PF02809: Ubiquitin interaction motif
          Length = 564

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 185 YQDLEQERAEAAVDLSGNPAEASAN 259
           Y D+E+E   AA++ S   AE S+N
Sbjct: 195 YNDIEEEMIRAAIEASKKEAEGSSN 219


>At3g52250.1 68416.m05742 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 1677

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -2

Query: 264 SVFAEASAGFPDRSTAASALSCSRSWYTRRSCKPSTQVHIK 142
           SV   +S GF D+S+  +A++ S      RS  P + +H++
Sbjct: 452 SVACSSSPGFADKSSPKAAIAASDVSNMCRSPSPVSSIHLE 492


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,573,830
Number of Sequences: 28952
Number of extensions: 119606
Number of successful extensions: 519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)