Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c12
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    27   0.86 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.0  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
 Frame = +1

Query: 124 FTNEAYPLFV------TWKIGKEHRLRGCIGTFNAMHLHSGLREYAITSALRDSRFPITR 285
           F +E Y ++V      T   G +H + G   T +++HLH+G     + SA  ++ + + +
Sbjct: 248 FKHEPYDIYVDPSSSPTPSFGSDHGIGGV--TSSSVHLHTGGHSTVLGSATDNNNYILAQ 305

Query: 286 EEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEFVSE 402
           ++  +        QH  + +H   +    H   ++F +E
Sbjct: 306 QQQQQHHHH----QHQPQQQHQQQYHSHPHHTPVQFKTE 340


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 737 CD*PGRRQADRFNCRTLMDPQATLDVELPALR 642
           C  P R + +      + DP++T+  E+ ALR
Sbjct: 425 CKRPFRHKGNLIRHMAMHDPESTVSKEMEALR 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,358
Number of Sequences: 2352
Number of extensions: 16206
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)