Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c12
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118445-1|AAM48474.1|  243|Drosophila melanogaster SD10002p pro...   295   4e-80
AE014297-3429|AAN13966.1|  243|Drosophila melanogaster CG5902-PB...   295   4e-80
AE014297-3428|AAF56216.1|  243|Drosophila melanogaster CG5902-PA...   295   4e-80
AE014134-1606|AAF52748.3|  377|Drosophila melanogaster CG13106-P...    29   7.1  

>AY118445-1|AAM48474.1|  243|Drosophila melanogaster SD10002p
           protein.
          Length = 243

 Score =  295 bits (724), Expect = 4e-80
 Identities = 132/186 (70%), Positives = 165/186 (88%), Gaps = 1/186 (0%)
 Frame = +1

Query: 37  SVAILDMCYFCFDVLYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLRGCIGTFNAMH 216
           +VA+ DMC FCF+VL C+L++++ P  P F+N+AYPLFVTWKIG++ RLRGCIGTF+AM 
Sbjct: 43  TVAVPDMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSAME 102

Query: 217 LHSGLREYAITSALRDSRF-PITREEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEF 393
           LH GLREYA+TSA +DSRF PI+R+E+PRL+VSVSILQ+FEEA+ +LDW+LG HGIRIEF
Sbjct: 103 LHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEF 162

Query: 394 VSERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAITADLRRSIKLTRYQSEEVS 573
           ++ERG KRTATYLPQVATEQGWDQ+QTIDSLLRKGGY+AAIT + R+SIKLTRY+S+E+ 
Sbjct: 163 LTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQ 222

Query: 574 ASYTDY 591
             Y +Y
Sbjct: 223 MHYKEY 228


>AE014297-3429|AAN13966.1|  243|Drosophila melanogaster CG5902-PB,
           isoform B protein.
          Length = 243

 Score =  295 bits (724), Expect = 4e-80
 Identities = 132/186 (70%), Positives = 165/186 (88%), Gaps = 1/186 (0%)
 Frame = +1

Query: 37  SVAILDMCYFCFDVLYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLRGCIGTFNAMH 216
           +VA+ DMC FCF+VL C+L++++ P  P F+N+AYPLFVTWKIG++ RLRGCIGTF+AM 
Sbjct: 43  TVAVPDMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSAME 102

Query: 217 LHSGLREYAITSALRDSRF-PITREEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEF 393
           LH GLREYA+TSA +DSRF PI+R+E+PRL+VSVSILQ+FEEA+ +LDW+LG HGIRIEF
Sbjct: 103 LHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEF 162

Query: 394 VSERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAITADLRRSIKLTRYQSEEVS 573
           ++ERG KRTATYLPQVATEQGWDQ+QTIDSLLRKGGY+AAIT + R+SIKLTRY+S+E+ 
Sbjct: 163 LTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQ 222

Query: 574 ASYTDY 591
             Y +Y
Sbjct: 223 MHYKEY 228


>AE014297-3428|AAF56216.1|  243|Drosophila melanogaster CG5902-PA,
           isoform A protein.
          Length = 243

 Score =  295 bits (724), Expect = 4e-80
 Identities = 132/186 (70%), Positives = 165/186 (88%), Gaps = 1/186 (0%)
 Frame = +1

Query: 37  SVAILDMCYFCFDVLYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLRGCIGTFNAMH 216
           +VA+ DMC FCF+VL C+L++++ P  P F+N+AYPLFVTWKIG++ RLRGCIGTF+AM 
Sbjct: 43  TVAVPDMCLFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSAME 102

Query: 217 LHSGLREYAITSALRDSRF-PITREEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEF 393
           LH GLREYA+TSA +DSRF PI+R+E+PRL+VSVSILQ+FEEA+ +LDW+LG HGIRIEF
Sbjct: 103 LHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEF 162

Query: 394 VSERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAITADLRRSIKLTRYQSEEVS 573
           ++ERG KRTATYLPQVATEQGWDQ+QTIDSLLRKGGY+AAIT + R+SIKLTRY+S+E+ 
Sbjct: 163 LTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYRAAITPETRKSIKLTRYRSQEIQ 222

Query: 574 ASYTDY 591
             Y +Y
Sbjct: 223 MHYKEY 228


>AE014134-1606|AAF52748.3|  377|Drosophila melanogaster CG13106-PA
           protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +1

Query: 70  FDVLYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLRGCIGTFNAMHLHSGLREYAIT 249
           F +L C++   +     K  NE     + W I  + +L G + + NA++ H  L E+   
Sbjct: 202 FAILMCRVLQHKLRSLEKLKNEQVRGEIIWCIKYQLKLSGFVDSMNALNTHLHLVEFLCF 261

Query: 250 SAL 258
            A+
Sbjct: 262 GAM 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,053,904
Number of Sequences: 53049
Number of extensions: 698709
Number of successful extensions: 1556
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)