Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c12
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50795-3|CAA90664.1|  200|Caenorhabditis elegans Hypothetical pr...   191   5e-49
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ...    31   0.70 
U88176-1|AAO91741.1|  459|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U29157-1|AAA68423.4|  675|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z50795-3|CAA90664.1|  200|Caenorhabditis elegans Hypothetical
           protein R166.3 protein.
          Length = 200

 Score =  191 bits (465), Expect = 5e-49
 Identities = 91/187 (48%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
 Frame = +1

Query: 43  AILDMCYFCFDVLYCQLHSMEPPQTPK-FTNEAYPLFVTWKIGKEHRLRGCIGTFNAMHL 219
           A + M  +CFDV+  QL+  + P  PK   N   PLFVTWK G +H LRGCIGTF+ + L
Sbjct: 4   ANIQMAVYCFDVINAQLNREKEPPVPKEIPNVKLPLFVTWKKGHQHDLRGCIGTFSDLRL 63

Query: 220 HSGLREYAITSALRDSRF-PITREEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEFV 396
             GL EYA TSA  DSRF PI+REEVP L   VS+L +FE   ++ DW +G+HG+R+ F 
Sbjct: 64  GEGLNEYAKTSAFHDSRFKPISREEVPSLQCGVSLLINFEPIHNFRDWTIGRHGVRMNF- 122

Query: 397 SERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAITADLRRSIKLTRYQSEEVSA 576
            +    R+A +LP+VA EQGW+ ++TID L+RK GY   I   LR ++++ R+QS ++  
Sbjct: 123 DDGHRNRSAVFLPEVAQEQGWNHVETIDHLIRKSGYGGHINDALRSALRIVRFQSSKLVL 182

Query: 577 SYTDYVN 597
            Y DYVN
Sbjct: 183 DYKDYVN 189


>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
            protein Y76B12C.7 protein.
          Length = 1454

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 511  AITADLRRSIKLTRYQSEEVSASYTDYVNRRC*RPPFES 627
            AI  D R S+ L R+Q +  + S     +R+C +PP  S
Sbjct: 1228 AIACDARESMSLIRFQEDNKAMSIASRDDRKCAQPPMAS 1266


>U88176-1|AAO91741.1|  459|Caenorhabditis elegans Hypothetical
           protein F18F11.5 protein.
          Length = 459

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 102 GTTADAQIHK--RGLSFICDLEDRERAPSKGMHWDLQRYALTFR 227
           G T D +I K  R +  +C L  +  AP  G HW L+   + FR
Sbjct: 14  GNTPD-EIEKISRTIEDLCQLRHKRLAPMYGYHWRLETELMVFR 56


>U29157-1|AAA68423.4|  675|Caenorhabditis elegans Hypothetical
           protein C34D10.2 protein.
          Length = 675

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 739 TVTDQEGDRPIDSIVEH*WIHKQH*M*SCQR*ELRSKGSRMA--GVSNAGSHNQCMRRKP 566
           TV D EG      ++E    H Q  + SC + E   K +R+   G +    HN   RR+P
Sbjct: 171 TVVDGEGRDKTSFVIEDPQWHSQDHVLSCYKTEQCRKPARLCRQGYACPFYHNSKDRRRP 230

Query: 565 P 563
           P
Sbjct: 231 P 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,754
Number of Sequences: 27780
Number of extensions: 353354
Number of successful extensions: 931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)