Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26c11
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 132 3e-31
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 45 7e-05
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 44 9e-05
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 0.66
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 0.66
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 30 1.5
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 30 1.5
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 29 3.5
U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm recept... 29 3.5
U40954-5|AAB52653.1| 121|Caenorhabditis elegans Hypothetical pr... 28 8.2
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 28 8.2
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 28 8.2
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 193 bits (471), Expect = 1e-49
Identities = 100/155 (64%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
Frame = +1
Query: 295 KKPREEEEDSELITDINVDLLQSRIVIHTLET-HEGCTHEVAIPPNQEYAPLLPLT-TEP 468
K+ R EEE+ + + ++ I++HT+ T +E CTHEVAIPPN E+A L + TEP
Sbjct: 65 KRARVEEEEE--VEEARME----NIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEP 118
Query: 469 VKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIK 648
K Y F LD FQK+AILCIDN QSVLVSAHTSAGKTVVA YAIA L+ KQRVIYT+PIK
Sbjct: 119 AKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIK 178
Query: 649 ALSNQKYREFSEEFHDVGLITGDVPINPSASCLIM 753
ALSNQKYRE EEF DVGL+TGDV +NP ASCL+M
Sbjct: 179 ALSNQKYRELEEEFKDVGLMTGDVTLNPDASCLVM 213
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 132 bits (319), Expect = 3e-31
Identities = 61/107 (57%), Positives = 83/107 (77%)
Frame = +1
Query: 433 EYAPLLPLTTEPVKQYSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLK 612
EY L+P ++Y F LDPFQ+ ++LC++ +S+ V+AHTSAGKTVVAEYAIAL
Sbjct: 277 EYKRLVPTMA---RKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQA 333
Query: 613 NKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVPINPSASCLIM 753
+K R +YT+PIKALSNQK+R+F + F DVGL+TGD+ ++P A+CLIM
Sbjct: 334 HKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIM 380
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 445 LLPLTTEPVKQ---YSFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKN 615
L+ + ++P K F D +Q++ + +D S L+ A TSAGKT V+ Y I L++
Sbjct: 767 LIDIQSDPKKDDRVSGFAPDGWQRKMLDSVDRGNSALIIAPTSAGKTFVSYYCIEKVLRS 826
Query: 616 KQR--VIYTTPIKALSNQ 663
V+Y P KAL NQ
Sbjct: 827 SDNDVVVYVAPSKALINQ 844
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +1
Query: 478 YSF-ILDPFQKEAILCIDNL-QSVLVSAHTSAGKTVVAEYAIALSLKNK--QRVIYTTPI 645
Y+F +P Q + C+ +S L+ A T +GKT+ AE A+ L++ +V+Y P+
Sbjct: 956 YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPL 1015
Query: 646 KALSNQKYREFSEEFHD-----VGLITGDVPINP 732
K+L ++ ++ ++F D V ++GDV +P
Sbjct: 1016 KSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDP 1049
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Frame = +1
Query: 535 QSVLVSAHTSAGKTVVAEYAIALSLKNKQ-----------RVIYTTPIKALSNQKYREFS 681
+++L+ A T AGKT +A I ++ Q ++IY P+KAL+ + F
Sbjct: 109 ENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG 168
Query: 682 EEFHDVGL----ITGDVPIN 729
+ +GL +TGD ++
Sbjct: 169 KRLAPLGLKVKELTGDTQLS 188
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Frame = +1
Query: 421 PPNQEYAPLLPLTTEPVKQYSF----------ILDPFQKEAILCI-DNLQSVLVSAHTSA 567
PP E L PL V F + +P Q + + ++ ++V+V A +
Sbjct: 1289 PPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCAPNGS 1348
Query: 568 GKTVVAEYAIALSLKN--KQRVIYTTPIKALSNQKYREFSEEF-----HDVGLITGD 717
GKT +AE A+ +N + + +Y TP++ ++ + Y ++ H + L+TG+
Sbjct: 1349 GKTAIAELAVLRHFENTPEAKAVYITPMEDMATKVYADWKRRLEPAIGHTIVLLTGE 1405
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 496 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 675
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 676 FS 681
+
Sbjct: 105 LA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 496 PFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYRE 675
P Q++ I CI + + V+ + T +GKT A + I + K K+R TT I+AL RE
Sbjct: 49 PIQRKTIPCIMDGKDVVAMSRTGSGKT--AAFVIPMLQKLKRR--DTTGIRALMVSPTRE 104
Query: 676 FS 681
+
Sbjct: 105 LA 106
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 349 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 477
D+ + ++ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 130 DIGERQVTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 349 DLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQ 477
D+ + ++ + + + +G T VA P ++YAP +PL P +Q
Sbjct: 130 DIGERQVTVIEIASQKGSTKRVA--PRKDYAPSIPLPEHPAQQ 170
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 625 VIYTTPIKALSNQKYREFSEEFHDVGLITGDVPI 726
V+ + P+K+ + RE + H V +ITGD P+
Sbjct: 672 VVISCPLKSDTKTMIREIMDSSHVVAMITGDNPL 705
>U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm receptor
protein 185 protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -3
Query: 278 SVLDVIMCTLISSSSQLFQVWFFNIFNIWQLNRSFSYWCFIKTVKQTIYVRHFKQVTLQI 99
+V I C S +F V+FF I +++ + S C + +V + + + F+ + +Q
Sbjct: 203 AVFASIACMWFMILSSVFSVFFFGIKCYFRITEALSRTCNVSSVTKGLQQQLFQALVVQT 262
Query: 98 F 96
F
Sbjct: 263 F 263
>U40954-5|AAB52653.1| 121|Caenorhabditis elegans Hypothetical
protein ZK813.2 protein.
Length = 121
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Frame = +1
Query: 250 SVHMMTSSTLIPLYQKKPREEEEDSELITDIN---VDLLQSRIVIHTLETHEGCTHEVAI 420
S+H +S P + S +D+ Q R + + E+HEG H
Sbjct: 38 SIHGYVTSKAYPRKNRSASNSNSRSHEPSDLKPAGFGFSQHRSIRRSSESHEGRRHSSPN 97
Query: 421 PPNQEYAPLLP 453
PPNQ+ P
Sbjct: 98 PPNQQLPANFP 108
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 IDNLQSVLVSAHTSAGKTV-VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 690
IDN Q ++V T +GKT + +YAI L + ++ T P + + + +EE+
Sbjct: 554 IDN-QILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEY 609
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 IDNLQSVLVSAHTSAGKTV-VAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF 690
IDN Q ++V T +GKT + +YAI L + ++ T P + + + +EE+
Sbjct: 554 IDN-QILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEY 609
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,670,679
Number of Sequences: 27780
Number of extensions: 328573
Number of successful extensions: 893
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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