Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26c10
(657 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY880249-1|AAX11176.1| 432|Drosophila melanogaster ligand-gated... 30 3.2
AY880248-1|AAX11175.1| 449|Drosophila melanogaster ligand-gated... 30 3.2
AE014296-2589|ABC66136.2| 779|Drosophila melanogaster CG33989-P... 30 3.2
AE014296-2588|ABC66135.2| 762|Drosophila melanogaster CG33989-P... 30 3.2
AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p pro... 29 4.2
AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl... 29 4.2
AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-P... 29 4.2
U41064-1|AAC46953.1| 226|Drosophila melanogaster trunk protein. 28 9.7
AY070493-1|AAL47964.1| 117|Drosophila melanogaster GH01976p pro... 28 9.7
AE014134-1813|AAF52896.1| 235|Drosophila melanogaster CG5619-PA... 28 9.7
>AY880249-1|AAX11176.1| 432|Drosophila melanogaster ligand-gated
ion channel pHCl-B protein.
Length = 432
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 293 WRCDRNCLWVDLLLTRSILTFVTQVFLSAI 204
WR + +CL VDL+ TR + T VF+ I
Sbjct: 222 WRGNYSCLRVDLIFTRDRAFYFTTVFIPGI 251
>AY880248-1|AAX11175.1| 449|Drosophila melanogaster ligand-gated
ion channel pHCl-A protein.
Length = 449
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 293 WRCDRNCLWVDLLLTRSILTFVTQVFLSAI 204
WR + +CL VDL+ TR + T VF+ I
Sbjct: 222 WRGNYSCLRVDLIFTRDRAFYFTTVFIPGI 251
>AE014296-2589|ABC66136.2| 779|Drosophila melanogaster CG33989-PF,
isoform F protein.
Length = 779
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 293 WRCDRNCLWVDLLLTRSILTFVTQVFLSAI 204
WR + +CL VDL+ TR + T VF+ I
Sbjct: 552 WRGNYSCLRVDLIFTRDRAFYFTTVFIPGI 581
>AE014296-2588|ABC66135.2| 762|Drosophila melanogaster CG33989-PE,
isoform E protein.
Length = 762
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 293 WRCDRNCLWVDLLLTRSILTFVTQVFLSAI 204
WR + +CL VDL+ TR + T VF+ I
Sbjct: 552 WRGNYSCLRVDLIFTRDRAFYFTTVFIPGI 581
>AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p
protein.
Length = 453
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 313 RGNPLYA--DCAGPVTMVNLGARGVLYPAENVFKLKMIIFYI 432
RGNPL++ D PV V +L PA++V + K +YI
Sbjct: 90 RGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYI 131
>AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl
tRNA synthetase protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 313 RGNPLYA--DCAGPVTMVNLGARGVLYPAENVFKLKMIIFYI 432
RGNPL++ D PV V +L PA++V + K +YI
Sbjct: 90 RGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYI 131
>AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-PA
protein.
Length = 453
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 313 RGNPLYA--DCAGPVTMVNLGARGVLYPAENVFKLKMIIFYI 432
RGNPL++ D PV V +L PA++V + K +YI
Sbjct: 90 RGNPLFSVYDQMNPVVTVQQNFDNLLIPADHVSRQKSDCYYI 131
>U41064-1|AAC46953.1| 226|Drosophila melanogaster trunk protein.
Length = 226
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 473 SISIPFFCDLFLYTI*NIIIFSLKTFSAGYKTPLAPRF-TIVTGPAQSAYRGFPR-PGWN 300
S +PF+ D ++ + + F+ K APR ++ T A G PR G+
Sbjct: 69 SYELPFYADSDAISVSHFPAWETNHFALVEKKKEAPRSKSLRTRSAFMDRVGHPRIDGFK 128
Query: 299 RR-WRCDRNCLWVDL 258
+R W C W+DL
Sbjct: 129 QRPWECSSKINWIDL 143
>AY070493-1|AAL47964.1| 117|Drosophila melanogaster GH01976p
protein.
Length = 117
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 540 VQLFYCMS*ARLLYM*L*-STISFYFHSFFLRFISVYNI 427
VQL + R+ Y L I+FY SF LRF+S+ NI
Sbjct: 29 VQLVFIRPRTRVKYYFLILKIIAFYLDSFVLRFLSIKNI 67
>AE014134-1813|AAF52896.1| 235|Drosophila melanogaster CG5619-PA
protein.
Length = 235
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 473 SISIPFFCDLFLYTI*NIIIFSLKTFSAGYKTPLAPRF-TIVTGPAQSAYRGFPR-PGWN 300
S +PF+ D ++ + + F+ K APR ++ T A G PR G+
Sbjct: 78 SYELPFYADSDAISVSHFPAWETNHFALVEKKKEAPRSKSLRTRSAFMDRVGHPRIDGFK 137
Query: 299 RR-WRCDRNCLWVDL 258
+R W C W+DL
Sbjct: 138 QRPWECSSKINWIDL 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,574,358
Number of Sequences: 53049
Number of extensions: 612102
Number of successful extensions: 1590
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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