Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26c10
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered averme... 30 1.7
U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amin... 30 1.7
AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine re... 29 3.8
U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical pr... 28 6.7
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 6.7
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 6.7
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 6.7
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 6.7
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform a protein.
Length = 416
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 152 LLDLAHQSG*SQNNPSKIWQIGKPVLQKSVLNESITSLPTNNYDRSATSDSTQVAEIPCM 331
L+DLA + +Q+ + W+ KP+ QK L +S+ S + + T E C+
Sbjct: 185 LIDLASYAYTTQDIKYE-WKEKKPIQQKDGLRQSLPSFELQDVVTDYCTSLTNTGEYSCL 243
Query: 332 RT 337
RT
Sbjct: 244 RT 245
>U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2A protein.
Length = 416
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 152 LLDLAHQSG*SQNNPSKIWQIGKPVLQKSVLNESITSLPTNNYDRSATSDSTQVAEIPCM 331
L+DLA + +Q+ + W+ KP+ QK L +S+ S + + T E C+
Sbjct: 185 LIDLASYAYTTQDIKYE-WKEKKPIQQKDGLRQSLPSFELQDVVTDYCTSLTNTGEYSCL 243
Query: 332 RT 337
RT
Sbjct: 244 RT 245
>AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine
receptor, class t protein65 protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 237 DFCNTGFPICHIFEGLFWLYP 175
++C+ +CH F GLF ++P
Sbjct: 102 NYCDVSQAVCHFFTGLFLIFP 122
>U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical
protein K09H11.6 protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -3
Query: 628 CSLLHCILCIYL*ALVSCCFVYVCFIVQFCTIVLLYELGTPFVHVVM 488
C+LLH I+CI L A+ F+YV F ++ +LG FV V++
Sbjct: 93 CALLHLIICILLSAIF---FLYVVTRATFYSV--WSDLGFFFVFVIL 134
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 242 LNESITSLPTNNYDRSATSDSTQVAEIPCMRTAQDR 349
LN+ ITSL +N SA S S+QV + T DR
Sbjct: 877 LNQKITSLQSNLPQSSAPSSSSQVDSKTSLETFFDR 912
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 242 LNESITSLPTNNYDRSATSDSTQVAEIPCMRTAQDR 349
LN+ ITSL +N SA S S+QV + T DR
Sbjct: 877 LNQKITSLQSNLPQSSAPSSSSQVDSKTSLETFFDR 912
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 242 LNESITSLPTNNYDRSATSDSTQVAEIPCMRTAQDR 349
LN+ ITSL +N SA S S+QV + T DR
Sbjct: 877 LNQKITSLQSNLPQSSAPSSSSQVDSKTSLETFFDR 912
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 242 LNESITSLPTNNYDRSATSDSTQVAEIPCMRTAQDR 349
LN+ ITSL +N SA S S+QV + T DR
Sbjct: 781 LNQKITSLQSNLPQSSAPSSSSQVDSKTSLETFFDR 816
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 515 RHAFCTCSYEAQFLSISIPFFCDLFLYTI*NIIIFSLKTFSAGYKTPLAPRFTIVTGPAQ 336
R C E + S IPFF D FL T+ + F + + FTI + PA+
Sbjct: 726 RKLILECDTETK--SFLIPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTI-SQPAK 782
Query: 335 S 333
S
Sbjct: 783 S 783
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 515 RHAFCTCSYEAQFLSISIPFFCDLFLYTI*NIIIFSLKTFSAGYKTPLAPRFTIVTGPAQ 336
R C E + S IPFF D FL T+ + F + + FTI + PA+
Sbjct: 726 RKLILECDTETK--SFLIPFFWDFFLITLCTLYAFKTRNLPENFNEAKFIGFTI-SQPAK 782
Query: 335 S 333
S
Sbjct: 783 S 783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,583,907
Number of Sequences: 27780
Number of extensions: 333619
Number of successful extensions: 1019
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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