Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c05
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer :...    29   2.5  

>Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical
           protein T06E6.6 protein.
          Length = 329

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 481 IFPLLSAHPLH-LNEWYQNVCAFHCHFVYHNF 389
           IFP L+  PL  L EW++   +F  +FV+ NF
Sbjct: 67  IFPALAGTPLGILTEWFEVPTSFQTYFVFTNF 98


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 331 GLNLTGTHTITQKQIDELYENCGIQSGNERHIRFDTIHLNGVDGLTT 471
           G +LT  H+ T+        +CGI+ GN + + +  +H  G D + T
Sbjct: 215 GAHLTSVHSETENTFVANLASCGIKEGNPKDLAWIGMHKVGQDWVWT 261


>Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical
           protein C06H5.2 protein.
          Length = 382

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
 Frame = -1

Query: 637 YQKSQLTNYHL*FHENELVMLM---LLKYGLDKPHCMMCHQSIPMKVVYNLLSIEI---- 479
           YQ+S L  +H+   EN + + M   L+ Y LD   C++ ++   + +V N   +E+    
Sbjct: 117 YQRSNLKKFHIFQEENNVSLYMNDNLVTYELDDDDCLVTYEEREL-LVKNKRPLEVAMND 175

Query: 478 -FPLLSAHPLHLNEWYQN 428
              LL    L+L+ +Y N
Sbjct: 176 ASRLLKCRGLNLDYFYVN 193


>Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical
           protein C06H5.1 protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
 Frame = -1

Query: 637 YQKSQLTNYHL*FHENELVMLM---LLKYGLDKPHCMMCHQSIPMKVVYNLLSIEI---- 479
           YQ+S L  +H+   EN + + M   L+ Y LD   C++ ++   + +V N   +E+    
Sbjct: 117 YQRSNLKKFHIFQEENNVSLYMNDNLVTYELDDDDCLVTYEEREL-LVKNKRPLEVAMND 175

Query: 478 -FPLLSAHPLHLNEWYQN 428
              LL    L+L+ +Y N
Sbjct: 176 ASRLLKCRGLNLDYFYVN 193


>AC006608-2|AAF39756.1| 1147|Caenorhabditis elegans Transformer : xx
            animals transformedinto males protein 2, isoform b
            protein.
          Length = 1147

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 324  KIWPQSNWNTYNNSEANR 377
            ++WPQ +WNT NN +  +
Sbjct: 1125 RVWPQEHWNTANNEKGTQ 1142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,142
Number of Sequences: 27780
Number of extensions: 271056
Number of successful extensions: 593
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)