Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26c01
         (410 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical p...    31   0.43 
Z93382-11|CAI46609.1|  390|Caenorhabditis elegans Hypothetical p...    29   0.99 
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    29   0.99 
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   3.0  
Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AL132895-3|CAC14400.1|  676|Caenorhabditis elegans Hypothetical ...    26   9.2  

>L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical
           protein ZK688.1 protein.
          Length = 192

 Score = 30.7 bits (66), Expect = 0.43
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +3

Query: 186 NREIYNKLIEIEMRIDRLLQEKH 254
           NR IY+K+IEIE RI+R+ ++++
Sbjct: 49  NRTIYHKIIEIEKRIERIEEKEN 71


>Z93382-11|CAI46609.1|  390|Caenorhabditis elegans Hypothetical
           protein F45G2.2b protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 0.99
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +3

Query: 171 VMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVK 350
           ++SK    +   +  IE   + LL+E+ L+++   Q+N+++   +++   +A   G    
Sbjct: 245 LISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRSEYEVLQEQMAEASGQLTA 304

Query: 351 EIH 359
           E H
Sbjct: 305 EAH 307


>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
            protein F45G2.2a protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 0.99
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +3

Query: 171  VMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVK 350
            ++SK    +   +  IE   + LL+E+ L+++   Q+N+++   +++   +A   G    
Sbjct: 1090 LISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRSEYEVLQEQMAEASGQLTA 1149

Query: 351  EIH 359
            E H
Sbjct: 1150 EAH 1152


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 282 CIDAVAELEDVFLVKVCQSAFQFQLVYCKFLD 187
           CID + +  ++ L   C+  FQF + +C+  D
Sbjct: 137 CIDVMCDDLEIMLNSECEKLFQFVIEFCRCED 168


>Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical
           protein F31B9.3 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 258 QVQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK*NTDLIK 404
           + +L+ +YND +        H + M+    KE+ ++L  A   +T+LIK
Sbjct: 138 ETELMREYNDEERRKYEENEHKSRMQKKERKELLEQLLAAGSTDTELIK 186


>AL132895-3|CAC14400.1|  676|Caenorhabditis elegans Hypothetical
           protein Y59A8A.3 protein.
          Length = 676

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 10/57 (17%), Positives = 30/57 (52%)
 Frame = +3

Query: 204 KLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNL 374
           ++IE   R++ L+ E +  +   H+Y   ++     +NH       T++++ +++++
Sbjct: 401 QMIENYTRLEALIGELNRDISEFHEYKKQQEVIVNELNHREKAHLDTIEQLREQISI 457


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,287,039
Number of Sequences: 27780
Number of extensions: 122428
Number of successful extensions: 371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)