Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26b20
(622 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 0.95
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 26 3.8
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 3.8
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 26 3.8
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 26 5.1
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 25 6.7
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 8.8
SPBC3E7.10 |fma1||methionine aminopeptidase Fma1 |Schizosaccharo... 25 8.8
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 8.8
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 28.3 bits (60), Expect = 0.95
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 286 YFMNSALRAIKAASLSWCRWNQFRWVSLRVYSFFCKRIDLFVDSLMFHFHIDSCKPVSFL 107
+F A I A C W ++ V CK IDL DS + H + + +S+
Sbjct: 182 FFEEIADACISALPQDACLWAMEVCNTILVSDLPCKLIDLHNDSFLHHSNYYAGFGLSYY 241
Query: 106 LFLS 95
L+LS
Sbjct: 242 LYLS 245
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 181 YKKNCIHADLPNEIDSSGTKKGXXXXXXXKHCS 279
++++C H P + +GTK +HCS
Sbjct: 198 HEEHCHHGKFPRPVPHNGTKPDHKPWKHEEHCS 230
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 181 YKKNCIHADLPNEIDSSGTKKGXXXXXXXKHCS 279
++++C H P + +GTK +HCS
Sbjct: 393 HEEHCHHGKFPRPVPHNGTKPDHKPWKHEEHCS 425
Score = 25.8 bits (54), Expect = 5.1
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 181 YKKNCIHADLPNEIDSSGTKKGXXXXXXXKHCS 279
++++C H P + +GTK +HCS
Sbjct: 310 HEEHCHHGRFPRPVPHNGTKPDHKPWKHEEHCS 342
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 YKKNCIHADLPNEIDSSGTKKGXXXXXXXKHC 276
++++C H P I +GTK +HC
Sbjct: 283 HEEHCHHGKFPRPIPHNGTKPDHKPWKHEEHC 314
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +2
Query: 56 MESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQIN 175
M+ +D YF+ +++ + +F+ ++ E+ Q +E+IN
Sbjct: 123 MDEHDTE-YFLKLKQAQPSLSKFSELDFEIVMQTFEEEIN 161
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 115 RQVCKNQYGSETSSYRRTNQSVYKKNCIHADLPNEIDSSGTK 240
+++ K Y S++SS ++ + K +AD+P E+D++ TK
Sbjct: 270 QELTKATYVSQSSSISSEDEEIAK----NADVPAEVDNNSTK 307
>SPAPB8E5.07c |||ribosome biogenesis protein
Rrp12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1163
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 341 CFFLRDIRIPVLHNY*LNIFYEQCFKSNKSSKPFLVP 231
C LRDIR + + I C K S P+L+P
Sbjct: 371 CDALRDIRFRLAYPECFQIISSLCDKLGPHSDPYLIP 407
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 6.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 74 RPYFILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKLI 226
R YF++ + E + N++ K+ DE NP+ + +Y + P KL+
Sbjct: 140 RIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPY--QVLYDRLGPLKLM 188
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 86 ILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKL 223
I I+ +EE+ R A I E++ + E+ K YT+ + L
Sbjct: 356 ISIKAQEEERKRQAEIEKEIRQSRLQEEERKKKKLAKYTEVIISNL 401
>SPBC3E7.10 |fma1||methionine aminopeptidase Fma1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 368 GEESW*CSWNVNKNINLPQDVYK 436
G+E + SWN++K+++ P +V K
Sbjct: 38 GQECFRNSWNIHKHLHRPPNVEK 60
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -2
Query: 525 LFRIYYCPNLNPKKDTVLNICMIVNKLS 442
+F+ Y PN+ K+T+L+ C +++ L+
Sbjct: 1521 IFKSYCMPNVAISKETLLDACRLLDFLT 1548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,635,413
Number of Sequences: 5004
Number of extensions: 55257
Number of successful extensions: 166
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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