Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26b16
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,266...    36   0.046
10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140     30   2.3  
06_03_0568 + 22351552-22351679,22352176-22352227,22353044-223531...    29   5.2  
05_07_0341 - 29398221-29398345,29398757-29398811,29398904-293989...    28   6.9  
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510...    28   6.9  
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500...    28   9.2  
01_07_0019 + 40494709-40494767,40495619-40495703,40495777-404958...    28   9.2  

>01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,
            2668344-2668410,2668473-2668562,2668672-2668787,
            2668999-2671924
          Length = 1170

 Score = 35.5 bits (78), Expect = 0.046
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +1

Query: 424  CGT*WKYNCEPAHCTPPQVSTETGPRLQVSRNDRLPHGNLVIISQS*RTTVSFR 585
            CG  W   C P HC    + +     L+V  N  LP   L    QS RT   F+
Sbjct: 1003 CGNKWYSKCSPVHCRKLDIPSSEVALLKVKTNINLPLLELRTAEQSLRTCADFK 1056


>10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140
          Length = 309

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 429 ATLGTPEKLPAGPWSAKSSISCRTLPILRCKVAAFQFGWS-SRYSCM 292
           AT GTP  L AGP     S   +++P  +C  AA    W+ S + C+
Sbjct: 23  ATPGTPAPLFAGPRVDSLSYERKSMPRCKCLPAAVAEAWAPSAHGCV 69


>06_03_0568 +
           22351552-22351679,22352176-22352227,22353044-22353117,
           22353233-22353322,22353833-22353976,22354885-22354973,
           22355539-22355612,22357233-22357317,22357677-22357952,
           22358392-22358420
          Length = 346

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 193 PWLPYHFIDFEIRIFL*SLTYSIVFLE 113
           PW+    IDF I +F  S+ Y + FLE
Sbjct: 163 PWMAATLIDFYINVFAISVNYILWFLE 189


>05_07_0341 -
           29398221-29398345,29398757-29398811,29398904-29398981,
           29399063-29399154,29399237-29399260,29399353-29399471,
           29399839-29399908,29399985-29400051,29400145-29400219,
           29400313-29400351,29400735-29400827,29401611-29401634
          Length = 286

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 468 GTVCRFTVILPSRATLGTPEK---LPAGPWSAKSSISCRTLPILRCKVAAF 325
           G + +  ++LP   TL   +    LP GPW+A   +     P LR +V AF
Sbjct: 175 GDILKPDLVLPLMETLPIEQLASYLPEGPWTAGDILELLQSPPLRQQVEAF 225


>04_04_1696 +
           35448667-35449641,35449726-35450562,35450667-35451001,
           35451371-35451497,35451594-35451752,35451872-35453053,
           35453164-35453424,35453513-35453761
          Length = 1374

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 34  RRLFICNSFINRSCWRPINAQNKTGKF 114
           RRL +C   +NR C R     +K  KF
Sbjct: 698 RRLSVCGHLVNRDCLRYFGLGSKVAKF 724


>03_05_0248 +
           22348504-22348568,22349064-22349371,22349476-22350039,
           22350082-22350128,22351244-22351715,22352349-22352611
          Length = 572

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -1

Query: 651 FRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPMWQS 523
           + +S  + +P+ R+S +  +  S+++GG +    N  +P+W S
Sbjct: 333 YYNSSALLEPTTRSSLSKAIEVSKKFGGVTFFDLNLPLPLWSS 375


>01_07_0019 +
           40494709-40494767,40495619-40495703,40495777-40495836,
           40495934-40496044,40496127-40496204,40496276-40496347,
           40496944-40497057,40498034-40498538,40499011-40499108,
           40499185-40499215,40499346-40499520,40499849-40500008,
           40501436-40501855,40502313-40503203
          Length = 952

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 323 WNAATLHLSMGKVRHEMLLFADQG 394
           W+A T  L MG+ R   LLFA  G
Sbjct: 789 WSARTAALGMGRARRSKLLFAVDG 812


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,610,125
Number of Sequences: 37544
Number of extensions: 492556
Number of successful extensions: 1212
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)