Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26b13
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 221 8e-59
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 29 0.84
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 27 2.6
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 3.4
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 26 4.5
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 26 4.5
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 26 5.9
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 25 7.8
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 25 7.8
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 221 bits (540), Expect = 8e-59
Identities = 94/163 (57%), Positives = 128/163 (78%)
Frame = +1
Query: 199 IKLSVLSMAAILSFATRLFSVLRFESVIHEFDPYFNYRTTRYLTEEGFYNFHNWFDDRAW 378
+K+ +L A+ S ++RLFSV+R+ES+IHEFDP+FN+R ++ L E+GFYNF NWFD+R+W
Sbjct: 24 LKVLILICIAVASVSSRLFSVIRYESIIHEFDPWFNFRASKILVEQGFYNFLNWFDERSW 83
Query: 379 YPLGRIIGGTIYPGLMVTSATLYNIMQYLNITIDIRNVCVFLAPFFSSLTTIVTYLLTKE 558
YPLGR+ GGT+YPGLMVTS ++ ++ L I ++IR+VCV LAP FS +T I TY L +E
Sbjct: 84 YPLGRVAGGTLYPGLMVTSGIIFKVLHLLRINVNIRDVCVLLAPAFSGITAIATYYLARE 143
Query: 559 LKNEGAGLVAAAMIAIVPGYISRSVAGSYDNEGIAIFCMLLTY 687
LK++ GL+AAA + I PGY SRSVAGSYDNE IAI ++ T+
Sbjct: 144 LKSDACGLLAAAFMGIAPGYTSRSVAGSYDNEAIAITLLMSTF 186
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 28.7 bits (61), Expect = 0.84
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 421 LMVTSATLYNIMQYLNITIDIRNVCVFLAPFFSSLTTI 534
++VTS L + +QYL I I I FL+P + T +
Sbjct: 1004 VLVTSIFLLSSLQYLGICIGINQSSEFLSPIWKKKTYV 1041
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 388 GRIIGGTIYPGLMVTSATLYNIMQYLNITIDIRNVCVFLAPFFSSLTTIVTYLLTKE 558
GR+IG G ++ LY I +LN T ++ CV LA LT +T + E
Sbjct: 185 GRMIGVGNVLGYLLGYLPLYRIFSFLNFT-QLQVFCV-LASISLVLTVTITTIFVSE 239
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 251 KRVAKDKIAAIDNTESFINV--SCLSEDKYGNLDLL 150
+ + DKI +++ + I +C+S +YGN D L
Sbjct: 143 EEICADKIETVESEKELIKAIRTCISSKQYGNEDFL 178
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 438 HSLQYNAVLKHNN*HQKCMCVLGSILLLTHNYCHIPP 548
H L + VL + + L ++L+THN H+PP
Sbjct: 833 HELAFGCVLGSG----RTLANLAPMMLITHNASHVPP 865
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = -1
Query: 263 RTENKRVAKDKIAAIDNTESFINVSCLSEDKYGNLDLLCVSAVI 132
++EN+ V + KI NTE +V C+S++ N+++ ++ +I
Sbjct: 318 KSENRTVEEMKIGDFGNTEEAKDV-CVSDEDIHNVNIKQITTLI 360
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 25.8 bits (54), Expect = 5.9
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Frame = +1
Query: 199 IKLSVLSMAAILSFATRLFSVLRFESVIHEFDPYFNYRTTRYLTEEGFYNFHNWFDDRAW 378
+ ++V A +SF L S L F V H + R LT++ F+ F A+
Sbjct: 89 LAITVFREAISISFFM-LLSTLMFARVFHSICSFRTERLQIQLTDQRFHIFSRL--TCAY 145
Query: 379 YPLGRIIGGTIY-----PGLMVTSATLYNIMQY----LNITIDIRNVCVFL--APFFSSL 525
+ L + IY L S + + ++ LN+TI+ +C++L A +
Sbjct: 146 FVLSILDASLIYLCFTSEHLGDKSTRMLFVCEFSVLLLNLTIEASKLCIYLYEARHLDQV 205
Query: 526 -TTIVTYLLTKELKNEGAGLVAAAMI 600
TYL E+ +G L+A +++
Sbjct: 206 WDEKSTYLFRLEVCRDGLRLLAYSLL 231
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 569 SFFNSLVRRYVTIVVSEEKNGAKNTHTFLMSIVMFKYCIIL 447
SF++S V + V+I E+ N +NT F+ + K L
Sbjct: 16 SFYSSTVVKNVSIFDFEKVNQHRNTFAFICDVFWLKLSFTL 56
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 274 SVIHEFDPYFNYRT---TRYLTEEGFYNFHNWFD 366
S+ H+F P F RT R L GFY ++ F+
Sbjct: 9 SIYHQFQPLFRARTVHKVRSLGLNGFYRKYHGFN 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,588,911
Number of Sequences: 5004
Number of extensions: 51778
Number of successful extensions: 158
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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