Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26b09
(207 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 0.66
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 0.66
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 20 2.7
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 20 2.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 2.7
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 20 2.7
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 19 4.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 19 6.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 19 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 19 8.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 19 8.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 19 8.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 0.66
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -2
Query: 110 YLGSLQKSNIGTSLMTFLH-ENLTF 39
Y G L + +G SL F H E+L F
Sbjct: 330 YFGYLPQDMVGRSLFDFYHPEDLPF 354
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.2 bits (45), Expect = 0.66
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -2
Query: 110 YLGSLQKSNIGTSLMTFLH-ENLTF 39
Y G L + +G SL F H E+L F
Sbjct: 36 YFGYLPQDMVGRSLFDFYHPEDLPF 60
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.2 bits (40), Expect = 2.7
Identities = 7/36 (19%), Positives = 19/36 (52%)
Frame = -2
Query: 125 IIRNYYLGSLQKSNIGTSLMTFLHENLTFCIYKWKF 18
I++N+++ SL +++ +++ + KW F
Sbjct: 69 IVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIF 104
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.2 bits (40), Expect = 2.7
Identities = 7/36 (19%), Positives = 19/36 (52%)
Frame = -2
Query: 125 IIRNYYLGSLQKSNIGTSLMTFLHENLTFCIYKWKF 18
I++N+++ SL +++ +++ + KW F
Sbjct: 69 IVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIF 104
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 2.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 114 VPNNSLXDLNNLQYITM 164
+P NSL L+NLQ + +
Sbjct: 162 LPVNSLCSLDNLQTLNL 178
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 20.2 bits (40), Expect = 2.7
Identities = 7/36 (19%), Positives = 19/36 (52%)
Frame = -2
Query: 125 IIRNYYLGSLQKSNIGTSLMTFLHENLTFCIYKWKF 18
I++N+++ SL +++ +++ + KW F
Sbjct: 69 IVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIF 104
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 19.4 bits (38), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 107 LGSLQKSNIGTSLMTFLH 54
+G L K +GTS + LH
Sbjct: 98 MGILCKKTLGTSAGSLLH 115
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 19.0 bits (37), Expect = 6.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 5 DTKS*ISIYRYKKLNSHEEKSLVT 76
D K +S K+N+HE K V+
Sbjct: 435 DNKRKLSDSTMNKINNHEYKRSVS 458
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.6 bits (36), Expect = 8.2
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -2
Query: 203 VFFPIIFS 180
+FFPI+F+
Sbjct: 421 IFFPIVFA 428
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.6 bits (36), Expect = 8.2
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -2
Query: 203 VFFPIIFS 180
+FFPI+F+
Sbjct: 421 IFFPIVFA 428
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 59 EKSLVTYLCW 88
E LVT+LC+
Sbjct: 305 ESDLVTFLCY 314
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 59 EKSLVTYLCW 88
E LVT+LC+
Sbjct: 305 ESDLVTFLCY 314
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,229
Number of Sequences: 438
Number of extensions: 909
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2912559
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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