Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26b08
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   3.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.4  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    21   7.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.8  

>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 50  LLIEAQCTILQSKLTLLTVGIFLNECNEC 136
           +L    C ++  K+  L   +  N CN C
Sbjct: 40  ILDRGHCDVIGKKIKELLPEVLNNHCNRC 68


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 189 WRMVTVLFCKISYIQHCIHSLHSF 118
           WR + VLF   S +  C+ SL  +
Sbjct: 122 WRSLDVLFSTASILNLCVISLDRY 145


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 594 PPQDAGRPLS*PLNN*TQRIAHVCF 520
           P  D   P S PL+N  ++ A VC+
Sbjct: 18  PSGDILSPSSEPLDNDKEQSAQVCY 42


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 594 PPQDAGRPLS*PLNN*TQRIAHVCF 520
           P  D   P S PL+N  ++ A VC+
Sbjct: 18  PSGDILSPSSEPLDNDKEQSAQVCY 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,923
Number of Sequences: 438
Number of extensions: 3886
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)