Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26b05
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0065 + 461182-461271,462222-462288,462408-462664 41 0.001
12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 38 0.011
01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 38 0.011
02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 35 0.057
09_02_0530 + 10285844-10287217 32 0.40
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 30 1.6
04_04_0715 - 27502581-27502759,27503435-27503567 30 2.2
12_02_0270 - 16626301-16626630 29 2.8
02_05_0691 - 30949234-30949243,30949613-30950001,30950425-309504... 29 2.8
08_02_1604 - 28163318-28163347,28164594-28164911 29 3.8
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 29 3.8
07_03_1059 + 23636937-23636973,23637765-23637935,23638431-23638495 29 5.0
04_04_0320 + 24364369-24366165 28 6.6
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 28 6.6
09_06_0358 - 22504716-22505588 28 8.7
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 28 8.7
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 28 8.7
>05_01_0065 + 461182-461271,462222-462288,462408-462664
Length = 137
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 68 MKYTKQEWYTPAEVAVHNKATDCWVSINGKVLDLTSWLQD 187
M ++ YT EVA HN DCW+ I GKV +++ +L+D
Sbjct: 1 MSNDNKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLED 40
>12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529
Length = 150
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 92 YTPAEVAVHNKATDCWVSINGKVLDLTSWLQD 187
++ ++V H DCWV I+GKV D+T +L+D
Sbjct: 13 FSASDVVGHASRKDCWVVIHGKVYDVTKFLED 44
>01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592
Length = 135
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 95 TPAEVAVHNKATDCWVSINGKVLDLTSWLQD 187
T EV+ HN DCW+ I GKV ++T +L+D
Sbjct: 8 TLEEVSKHNTKDDCWLIIGGKVYNVTKFLED 38
>02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478
Length = 138
Score = 35.1 bits (77), Expect = 0.057
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 92 YTPAEVAVHNKATDCWVSINGKVLDLTSWLQD 187
Y+ EV+ HN DCW+ I GKV D++ ++++
Sbjct: 8 YSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEE 39
>09_02_0530 + 10285844-10287217
Length = 457
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 104 EVAVHNKATDCWVSINGKVLDLTSWL 181
E+ H D W+SI+G V D+T+W+
Sbjct: 23 ELRAHASRDDLWISISGDVYDVTAWV 48
>05_04_0149 - 18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 576 VEPVKELVIRIGL--VLAVTFPTTRLSSCHHGLVR 478
++P K+L + G + + +PTTR ++CHH L R
Sbjct: 1328 LQPAKKLSTKKGRSSLAGLAWPTTRKTTCHHSLAR 1362
>04_04_0715 - 27502581-27502759,27503435-27503567
Length = 103
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 443 GGCDRGAGKPLYSPQSGGCTESI 375
GG DRG G + + GGCTE++
Sbjct: 42 GGADRGWGDTVLKAEIGGCTETV 64
>12_02_0270 - 16626301-16626630
Length = 109
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 461 STRWRPLTKPWWQDESLVVGKVTAKTRPIRITNSLTGSTVTLEVCS 598
ST P P L VG+V A R +T+S ST T VCS
Sbjct: 25 STTANPAGSPPRAHVDLAVGRVLATARASALTSSRPSSTKTKPVCS 70
>02_05_0691 -
30949234-30949243,30949613-30950001,30950425-30950449,
30950594-30950688,30950842-30951359,30951652-30951736,
30951842-30952633
Length = 637
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 412 NGLPAPRSQPPAAGCTVDTLASPHQAMVARRKPCSRKSYGQ 534
N LPA RS PP A +V+ S A ++ P S + GQ
Sbjct: 309 NSLPASRSPPPDASPSVNKRHSSSSARNKKQSPPSYRKAGQ 349
>08_02_1604 - 28163318-28163347,28164594-28164911
Length = 115
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 707 IKFCCILWIVRGNAKCKTSCESCDGDNASLSDRLFPPSKPQGSL 576
+K +LW+ G AKC T + + DN + D+L P P L
Sbjct: 27 LKPYAVLWVDDG-AKCSTRVDLDNADNPNWDDKLTLPLPPSSRL 69
>04_04_1445 -
33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 622 HYLIDCFLRANLKGHCRTSQRVSDPYRSSFGRNFSDYKAFVLPPW 488
H + + R ++ C + RS FG++ SDY+ F+L W
Sbjct: 252 HEISEAIFRLSMNIACPAHLEPDEVRRSIFGQSVSDYENFLLNYW 296
>07_03_1059 + 23636937-23636973,23637765-23637935,23638431-23638495
Length = 90
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 443 GGCDRGAGKPLYSPQSGGCTESI 375
GG DRG G + + GGCTE++
Sbjct: 10 GGGDRGWGDTVLKAEIGGCTETV 32
>04_04_0320 + 24364369-24366165
Length = 598
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 528 VTFPTTRLSSCHHGLVR-GRQRVDGTTGCWWL*PW 427
VTF T + CH GLV+ GRQ + T + L PW
Sbjct: 419 VTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPW 453
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 319 CSPLS--VTIREPSLEARAGFHAIIFAVPVLDFTRACLNALADSELIL 182
C P+ I P+LE+ AG H I+ V++F A L +E IL
Sbjct: 84 CPPIKEGARIEAPTLESAAGPHTIVDGKEVVNFASANYLGLIGNEKIL 131
>09_06_0358 - 22504716-22505588
Length = 290
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 707 IKFCCILWIVRGNAKCKTSCESCDGDNASLSDRLFPPSKPQGSL 576
+K ++WI G AKC T + + DN + D+L P P L
Sbjct: 28 LKPYAVVWIDDG-AKCSTRVDLDNADNPTWDDKLTVPLPPSTRL 70
>06_03_1313 -
29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 640 VTEITHHYLIDCFLRANLKGHCRTSQRVSDPYRS 539
V E+ H L DC ++ HCR S+ VSD Y++
Sbjct: 643 VRELVVH-LTDCQIKDCSYRHCRESKMVSDHYKN 675
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 441 WL*PWRW*AVVQPTIGWVY*IHSSPLNQW 355
W PW+ V+ +GWV I P N+W
Sbjct: 170 WHAPWKNYRVISGHLGWVRSIAFDPSNEW 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,196,658
Number of Sequences: 37544
Number of extensions: 498236
Number of successful extensions: 1671
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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