Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a22
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical pr...    31   0.44 
Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z73098-11|CAA97338.1|  225|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    28   5.4  
AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical ...    28   5.4  
AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effe...    28   5.4  
Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical p...    27   7.2  
Z83219-5|CAM35834.1|  390|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine rece...    27   7.2  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    27   9.5  
AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2 pro...    27   9.5  
AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1 pro...    27   9.5  
AF016658-5|AAB66044.1|  186|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical
           protein F09C8.2 protein.
          Length = 762

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 161 FRNYKIYRP-NFGSIPVTGKFYAAHDQLKAESEEQTKKVDDYYHNVAQTRAKGPQSKYPS 337
           F + ++Y+  N   +P T  F+A H Q + + + Q+ K     H   Q +     S+   
Sbjct: 114 FSDEELYQALNMSPLPPTATFHALHQQQQQQQQHQSMKQQHAMHLQQQPQTDYLSSEVCY 173

Query: 338 PATENQEYGWY 370
           P+T + E   Y
Sbjct: 174 PSTSSYEPSGY 184


>Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G2.8 protein.
          Length = 197

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +3

Query: 279 ITITTSPRPGRRDHKANIRRRPLRTKSTAGTPHRSSK*TGAINVSTSRRRKAKTPKSK 452
           + I+ SPR  R     + RR  +R+ S      RSS   G++   T R R +K  +S+
Sbjct: 73  VVISPSPRRRRSSTSRSSRRSVVRSASRGSVSRRSSS-RGSVYGRTGRSRSSKRSRSR 129


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +2

Query: 62  KSAMGGDAKCTFGTRMAIDIHMLNEIIYREVKHFRNYKIYRPNFGSIPVTGKFYAAHDQL 241
           +S +GGD K     R +I  H+ +  +   +K  + Y +    +    +TG    A  +L
Sbjct: 450 ESPIGGDEKRQQKARESIS-HLFDAEMDASIKEAKKYSVSFDKYIKPKITGALKHAKIKL 508

Query: 242 KAESEEQTKKVDDYYHNV 295
            +   +  +  D YYH +
Sbjct: 509 MSRKRQSAEPDDFYYHEL 526


>Z73098-11|CAA97338.1|  225|Caenorhabditis elegans Hypothetical
           protein T21C9.11 protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 320 QSKYPSPATENQEYGWYTTPLVKMNRSDKRFYQPKKESENTKIEIVI 460
           Q K+PSP  E+      T P++ ++R  K  Y P  +    +  I I
Sbjct: 5   QFKHPSPTNEDGIKAPSTEPMLPIHRVQKPIYPPLPQIRKNRFNIQI 51


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 78  VTRNARSAHVWPSTYTCLTRSYTGKSNISGTIKFTDP 188
           +T N  S H + ST T  T ++TG S IS  +  T P
Sbjct: 828 ITMNLESYH-FQSTITATTINFTGTSEISSELTPTSP 863


>AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical
           protein Y2H9A.1 protein.
          Length = 898

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 116 RWPYVCRTCISRHRPSLIYIC 54
           R PYVC+T   R R S+ Y C
Sbjct: 460 RCPYVCKTVFGRLRTSVYYKC 480


>AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effect
           sterile 4 protein.
          Length = 898

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 116 RWPYVCRTCISRHRPSLIYIC 54
           R PYVC+T   R R S+ Y C
Sbjct: 460 RCPYVCKTVFGRLRTSVYYKC 480


>Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical
           protein Y57G11C.46 protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 537 TSLIISRCECLLKCHLDFLDLGLDIRITISILVFSLSFF 421
           TS+    CE L+ C L F   G  +  T ++L+F L  F
Sbjct: 106 TSMSYESCELLISCRLCF---GFRVIATATVLIFCLLLF 141


>Z83219-5|CAM35834.1|  390|Caenorhabditis elegans Hypothetical
           protein C31C9.8 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 415 VETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLR 308
           + T I  +H  E  G    LLV SG  R+  +W +R
Sbjct: 349 IHTGITAIHLQETLG----LLVTSGHNRVIMIWDVR 380


>U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 9 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 442 GVFAFLLRLVETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLRP 305
           GVF F ++ +     P+     C +PA + +LS    I +L+ +RP
Sbjct: 248 GVFCFFIQAIRLITHPIFECLICAIPAPIPLLSS---IISLYHIRP 290


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 347 ENQEYGWYTTPLVKMNRSDKR 409
           ENQ+Y W  TP  K ++ +KR
Sbjct: 113 ENQDYVWNVTPQSKSHKMEKR 133


>Z50857-5|CAJ43436.1|  719|Caenorhabditis elegans Hypothetical
           protein F11A1.3d protein.
          Length = 719

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 251 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 379
           +EE  K+++ +Y N  Q+    P+++ P P         Y TP
Sbjct: 413 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 455


>Z50857-4|CAC42283.1|  694|Caenorhabditis elegans Hypothetical
           protein F11A1.3b protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 251 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 379
           +EE  K+++ +Y N  Q+    P+++ P P         Y TP
Sbjct: 388 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 430


>Z50857-3|CAC42284.1|  753|Caenorhabditis elegans Hypothetical
           protein F11A1.3a protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 251 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 379
           +EE  K+++ +Y N  Q+    P+++ P P         Y TP
Sbjct: 447 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 489


>Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical
           protein D2013.2 protein.
          Length = 415

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 415 VETFIAPVHFDERCGVPAVLLVLSGRRRIFALWSLR 308
           + T I  +H  E  G    LLV SG+ R+  +W +R
Sbjct: 374 IHTGITAMHLQETLG----LLVTSGQNRVIMIWDVR 405


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 3   VINHTFGNSFRFYFYFRTDINQRWAVTRNARSAHVWPSTY 122
           +I+H    SF F FY +     RW V  N  +AHV+   Y
Sbjct: 268 IIHHFLSLSFAFTFYSQNFALHRWIVFFNL-TAHVFLYAY 306


>AF136239-1|AAD34463.1|  694|Caenorhabditis elegans DAF-12 A2
           protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 251 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 379
           +EE  K+++ +Y N  Q+    P+++ P P         Y TP
Sbjct: 388 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 430


>AF136238-1|AAD34462.1|  753|Caenorhabditis elegans DAF-12 A1
           protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 251 SEEQTKKVDDYYHNVAQTRAKGPQSKYPSPATENQEYGWYTTP 379
           +EE  K+++ +Y N  Q+    P+++ P P         Y TP
Sbjct: 447 AEEMYKRMNMFYENCIQSALDSPENQEPKPQEAMIPKEEYMTP 489


>AF016658-5|AAB66044.1|  186|Caenorhabditis elegans Hypothetical
           protein B0047.4 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +2

Query: 302 TRAKGPQSKYPSPATENQEYGWYTTPLVKMNRSDKRFYQPK-KESE 436
           T    PQ  Y   +TEN    W+   L K NR    F+  K KE E
Sbjct: 30  TPVAAPQPAYTGRSTENFNIPWFIEILRKTNRLAVYFHCDKLKEDE 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,165
Number of Sequences: 27780
Number of extensions: 271148
Number of successful extensions: 930
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)