Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a21
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical pr...   222   1e-58
L31492-1|AAC37252.1|  128|Caenorhabditis elegans ubiquitin/ribos...   222   1e-58
U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin prote...   147   4e-36
U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin prote...   146   9e-36
M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin p...   146   9e-36
Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical pr...    94   5e-20
AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical ...    75   4e-14
M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein ( C.ele...    74   6e-14
L16530-1|AAA28161.1|  163|Caenorhabditis elegans ubiquitin-like:...    62   2e-10
AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-lik...    62   2e-10
U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AF040645-9|AAB94972.2|  197|Caenorhabditis elegans Hypothetical ...    45   4e-05
AC006651-5|AAM48542.1|   47|Caenorhabditis elegans Ubiquitin-lik...    44   7e-05
AF040643-4|AAB94965.1|  110|Caenorhabditis elegans Hypothetical ...    38   0.005
Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical pr...    37   0.011
U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.      35   0.044
AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp (sp...    35   0.044
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr...    34   0.077
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical pr...    32   0.31 
AF099917-6|AAC68780.1|  264|Caenorhabditis elegans Hypothetical ...    31   0.41 
Z99281-7|CAC42379.1|   77|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical
           protein ZK1010.1 protein.
          Length = 128

 Score =  222 bits (543), Expect = 1e-58
 Identities = 108/128 (84%), Positives = 112/128 (87%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSD  
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 258 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYASLHPRATNCRKTXXGHTXN 437
           IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYA L PRA+NCRK   GH+  
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120

Query: 438 LRPKKKIK 461
           LR KKK+K
Sbjct: 121 LRIKKKLK 128


>L31492-1|AAC37252.1|  128|Caenorhabditis elegans
           ubiquitin/ribosomal fusion protein protein.
          Length = 128

 Score =  222 bits (543), Expect = 1e-58
 Identities = 108/128 (84%), Positives = 112/128 (87%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSD  
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 258 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYASLHPRATNCRKTXXGHTXN 437
           IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYA L PRA+NCRK   GH+  
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120

Query: 438 LRPKKKIK 461
           LR KKK+K
Sbjct: 121 LRIKKKLK 128


>U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin protein 1,
            isoform a protein.
          Length = 838

 Score =  147 bits (357), Expect = 4e-36
 Identities = 76/92 (82%), Positives = 79/92 (85%)
 Frame = +3

Query: 36   KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
            K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 747  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806

Query: 216  GKQLXDGRTLSDXXIQKESTLHLVLRLRGGTI 311
            GKQL DGRTLSD  IQKESTLHLVLRLRGG I
Sbjct: 807  GKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI 838



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760



 Score =  145 bits (351), Expect = 2e-35
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSD  
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 258 IQKESTLHLVLRLRGG 305
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  144 bits (348), Expect = 5e-35
 Identities = 74/90 (82%), Positives = 77/90 (85%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTL G TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456


>U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin protein
           1, isoform c protein.
          Length = 538

 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380



 Score =  145 bits (351), Expect = 2e-35
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSD  
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 258 IQKESTLHLVLRLRGG 305
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  144 bits (348), Expect = 5e-35
 Identities = 74/90 (82%), Positives = 77/90 (85%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTL G TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456



 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 49/61 (80%), Positives = 52/61 (85%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502

Query: 216 G 218
           G
Sbjct: 503 G 503


>M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin
           protein.
          Length = 838

 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
           K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730

Query: 216 GKQLXDGRTLSDXXIQKESTLHLVLRLRGG 305
           GKQL DGRTLSD  IQKESTLHLVLRLRGG
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760



 Score =  146 bits (354), Expect = 9e-36
 Identities = 75/92 (81%), Positives = 79/92 (85%)
 Frame = +3

Query: 36   KKS*ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 215
            K+S +  V+     MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 747  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806

Query: 216  GKQLXDGRTLSDXXIQKESTLHLVLRLRGGTI 311
            GKQL DGRTLSD  IQK+STLHLVLRLRGG I
Sbjct: 807  GKQLEDGRTLSDYNIQKQSTLHLVLRLRGGDI 838



 Score =  145 bits (351), Expect = 2e-35
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSD  
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 258 IQKESTLHLVLRLRGG 305
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical
           protein F45H11.2 protein.
          Length = 77

 Score = 94.3 bits (224), Expect = 5e-20
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           M I VKTLTG  I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +D  
Sbjct: 1   MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60

Query: 258 IQKESTLHLVLRLRGG 305
           +   S LHLVL LRGG
Sbjct: 61  VLGGSVLHLVLALRGG 76


>AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical
           protein F52C6.4 protein.
          Length = 292

 Score = 74.5 bits (175), Expect = 4e-14
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXX 257
           + + VKTL G TI + ++ +DT+E +K K+Q+K G+PPDQQRLIF   QL + R L    
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220

Query: 258 IQKESTLHLVLRLR 299
           I+ E  +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234



 Score = 35.1 bits (77), Expect = 0.034
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 69  SNTMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGI 185
           S TM + VKT TG TIT+E       +NVK +++DK+G+
Sbjct: 56  SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89



 Score = 33.9 bits (74), Expect = 0.077
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +3

Query: 99  LTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQKESTL 278
           +TG  IT  VEASD I+++  K+ + +  P     ++       D RT+SD  I+  STL
Sbjct: 98  VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151

Query: 279 HL 284
            L
Sbjct: 152 RL 153


>M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein (
           C.elegans ubiquitin A(UbiA) gene, 5' end. ).
          Length = 37

 Score = 74.1 bits (174), Expect = 6e-14
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIP 188
           MQIFVKTLTG TITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37


>L16530-1|AAA28161.1|  163|Caenorhabditis elegans
           ubiquitin-like:ribosomal proteinfusion protein protein.
          Length = 163

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 34/74 (45%), Positives = 50/74 (67%)
 Frame = +3

Query: 84  IFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQ 263
           +FVKTL   T+ LEV A++ + ++K KI+  EGIP ++QRL +AG+QL D    SD  I 
Sbjct: 2   VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56

Query: 264 KESTLHLVLRLRGG 305
            E+T+++ L L GG
Sbjct: 57  SEATIYVNLELLGG 70


>AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-like
           family protein 1,isoform a protein.
          Length = 163

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 34/74 (45%), Positives = 50/74 (67%)
 Frame = +3

Query: 84  IFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQ 263
           +FVKTL   T+ LEV A++ + ++K KI+  EGIP ++QRL +AG+QL D    SD  I 
Sbjct: 2   VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56

Query: 264 KESTLHLVLRLRGG 305
            E+T+++ L L GG
Sbjct: 57  SEATIYVNLELLGG 70


>U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical
           protein C16C8.4 protein.
          Length = 226

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = +3

Query: 81  QIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXI 260
           QIFVK L G +   ++   DT+ ++K  I+ +  IP     L F+GK+L D  ++ D  I
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213

Query: 261 QKESTLHLVLR 293
           QK ST+ +  R
Sbjct: 214 QKSSTITMYFR 224


>AF040645-9|AAB94972.2|  197|Caenorhabditis elegans Hypothetical
           protein F52C6.3 protein.
          Length = 197

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL---XDGRTLS 248
           ++I+V+   G T TL+  ASDT+ +VKAKI +K  I P+ Q+L+     L    D  TL 
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161

Query: 249 DXXIQKESTLHL 284
           D   +  STL L
Sbjct: 162 DNSFENGSTLRL 173


>AC006651-5|AAM48542.1|   47|Caenorhabditis elegans Ubiquitin-like
           family protein 1,isoform b protein.
          Length = 47

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 21/46 (45%), Positives = 33/46 (71%)
 Frame = +3

Query: 84  IFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 221
           +FVKTL   T+ LEV A++ + ++K KI+  EGIP ++QRL +A +
Sbjct: 2   VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46


>AF040643-4|AAB94965.1|  110|Caenorhabditis elegans Hypothetical
           protein F14D2.11 protein.
          Length = 110

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 26/72 (36%), Positives = 35/72 (48%)
 Frame = +3

Query: 81  QIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXI 260
           Q FV+ L G T TL V ASDT+E  K ++           R+ + GK L D  T  +  I
Sbjct: 44  QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98

Query: 261 QKESTLHLVLRL 296
              ST+ L  R+
Sbjct: 99  SNNSTMDLHFRI 110


>Z69904-3|CAA93780.1|  372|Caenorhabditis elegans Hypothetical
           protein ZK20.3 protein.
          Length = 372

 Score = 36.7 bits (81), Expect = 0.011
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
 Frame = +3

Query: 78  MQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLXDGRTLSD 251
           + +  +TLT     LE+    TI  VKA +  ++G    P+ Q+LI+ GK L D   + +
Sbjct: 52  LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111

Query: 252 XXIQKESTLHLVLRLRGGT-IEPS 320
                   + ++L  R  T + PS
Sbjct: 112 VGFDSSKFVVVMLSKRKVTEVAPS 135


>U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.
          Length = 655

 Score = 34.7 bits (76), Expect = 0.044
 Identities = 15/69 (21%), Positives = 37/69 (53%)
 Frame = +3

Query: 99  LTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQKESTL 278
           + G  +   ++ +  +  +K +IQD+ G+P  +Q+L+  G  + D  + +   +   + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643

Query: 279 HLVLRLRGG 305
           +L ++ RGG
Sbjct: 644 YLQVKERGG 652


>AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp
           (splicing factor) relatedprotein 21 protein.
          Length = 655

 Score = 34.7 bits (76), Expect = 0.044
 Identities = 15/69 (21%), Positives = 37/69 (53%)
 Frame = +3

Query: 99  LTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQKESTL 278
           + G  +   ++ +  +  +K +IQD+ G+P  +Q+L+  G  + D  + +   +   + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643

Query: 279 HLVLRLRGG 305
           +L ++ RGG
Sbjct: 644 YLQVKERGG 652


>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
           protein ZK688.5b protein.
          Length = 1595

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 21/73 (28%), Positives = 37/73 (50%)
 Frame = +3

Query: 75  TMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDX 254
           T+++ +KTL     T+ +   DTI+++    + +  I    QR+I  G+ L   +T+   
Sbjct: 20  TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79

Query: 255 XIQKESTLHLVLR 293
            I    T+HLV R
Sbjct: 80  GISDGQTVHLVDR 92


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
           protein ZK688.5a protein.
          Length = 1620

 Score = 33.9 bits (74), Expect = 0.077
 Identities = 21/73 (28%), Positives = 37/73 (50%)
 Frame = +3

Query: 75  TMQIFVKTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDX 254
           T+++ +KTL     T+ +   DTI+++    + +  I    QR+I  G+ L   +T+   
Sbjct: 20  TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79

Query: 255 XIQKESTLHLVLR 293
            I    T+HLV R
Sbjct: 80  GISDGQTVHLVDR 92


>Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical
           protein K08E3.7 protein.
          Length = 386

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +3

Query: 93  KTLTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQKES 272
           KT     +TL +  +  IE++   ++    IP D+  ++F GK+L     + D  +   +
Sbjct: 13  KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72

Query: 273 TLHLV 287
            + L+
Sbjct: 73  QIMLL 77


>AF099917-6|AAC68780.1|  264|Caenorhabditis elegans Hypothetical
           protein F54D10.7 protein.
          Length = 264

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +3

Query: 99  LTGXTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDXXIQKESTL 278
           L G  I +E+++ DTI  V   +    G+   +QRL+   K+L   +TL +  I+  S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248


>Z99281-7|CAC42379.1|   77|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9c protein.
          Length = 77

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 95  NPYGEXHYIGGGSFRHYRKCQS*NPRQGRYSSRP 196
           N YG  ++ GGG FRH     + N     Y++ P
Sbjct: 5   NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38


>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 95  NPYGEXHYIGGGSFRHYRKCQS*NPRQGRYSSRP 196
           N YG  ++ GGG FRH     + N     Y++ P
Sbjct: 5   NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 95  NPYGEXHYIGGGSFRHYRKCQS*NPRQGRYSSRP 196
           N YG  ++ GGG FRH     + N     Y++ P
Sbjct: 5   NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38


>Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical
           protein F26E4.5 protein.
          Length = 474

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
 Frame = +3

Query: 48  ILRVVYFSNTMQIFVKTLTGXTITLEVEASDTIE-NVKAKIQDKEGI----PPDQQRLIF 212
           +L V  F+N +++ VKT+ G  +T +   +   E N+  K+  K  +       QQ  I 
Sbjct: 213 VLSVGIFTNDVEVAVKTMKGSKVTADERITFLREANLMLKLNHKYVVRLYGVATQQEPIM 272

Query: 213 AGKQLXDGRTLSDXXIQKESTLHLVLR 293
              +L  G  L     +K+  L  VL+
Sbjct: 273 IVMELCSGGCLKSRIEKKDEQLSDVLK 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,073,575
Number of Sequences: 27780
Number of extensions: 236828
Number of successful extensions: 569
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)