Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a14
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF039051-5|AAB94265.2|  509|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC006619-2|AAK68254.1|  434|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical
           protein T15D6.10 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 156 HYRSMFVELFDGFIDLDERVE 94
           H+RS +   +  FID+DER+E
Sbjct: 295 HHRSKYFSKWTAFIDIDERLE 315


>AF039051-5|AAB94265.2|  509|Caenorhabditis elegans Hypothetical
           protein C14C6.7 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 156 HYRSMFVELFDGFIDLDERVE 94
           H+RS +   +  FID+DER+E
Sbjct: 304 HHRSKYFSKWTAFIDIDERLE 324


>AC006619-2|AAK68254.1|  434|Caenorhabditis elegans Hypothetical
           protein C46C11.2 protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -3

Query: 569 LYKSVININRSKIITRKCYHNTRRYTATKCSKAFILLFIVTYSLGRAEDPKSRFCIPRE 393
           L  S IN   +     K  H TR   + K S  ++L F+V+  +   + PK++ C+ +E
Sbjct: 103 LTMSCINAYIADEFPDKITHETRN-NSLKYSSGYLLTFLVSLLILDQKKPKTKNCLLKE 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,962,003
Number of Sequences: 27780
Number of extensions: 318771
Number of successful extensions: 916
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)