Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a14
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    23   3.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   3.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   3.4  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   4.5  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   4.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   4.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.0  

>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = -2

Query: 351 VPTFQYNTDTDIFEFLFAPVYHASV*EMITADNSIMCGILNLNLKTGQF 205
           +  +++ T       + AP +   +  MIT  +   C +L +   TG+F
Sbjct: 2   IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 50


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = -2

Query: 351 VPTFQYNTDTDIFEFLFAPVYHASV*EMITADNSIMCGILNLNLKTGQF 205
           +  +++ T       + AP +   +  MIT  +   C +L +   TG+F
Sbjct: 18  IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 66


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = -2

Query: 351 VPTFQYNTDTDIFEFLFAPVYHASV*EMITADNSIMCGILNLNLKTGQF 205
           +  +++ T       + AP +   +  MIT  +   C +L +   TG+F
Sbjct: 75  IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 123


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 372 PKPGGKPVPTF 340
           P+PG +P PTF
Sbjct: 27  PQPGRRPFPTF 37


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 372 PKPGGKPVPTF 340
           P+PG +P PTF
Sbjct: 13  PQPGRRPFPTF 23


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 519 FSCYYFRPIYINDRFIQEDLL 581
           FSCYY    +  D+  Q D L
Sbjct: 15  FSCYYSLKRHFQDKHEQSDTL 35


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 97  NSLIEVDEAIKKLNKHRTVVPGEKN 171
           +SLI +  A++++NK +++    KN
Sbjct: 293 DSLIVLTSALQEMNKSKSITEPPKN 317


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,969
Number of Sequences: 438
Number of extensions: 4203
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)