Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a10
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    27   0.49 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.0  
AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    24   4.6  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 288 SSPSVHQHCSGHADTDANASNNNISIL 208
           +S SVH H  GH+    +A++NN  IL
Sbjct: 277 TSSSVHLHTGGHSTVLGSATDNNNYIL 303


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 304  QPSLDQLDCGRAAQGLCQYRLHGRRAGLRGV 396
            Q  LD LD G AA  +C Y +HG   G  G+
Sbjct: 1416 QDYLDPLD-GPAASVVCYYIVHGNEDGHFGL 1445


>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = -3

Query: 514 DSLHVLGVNLLQQTRERRQRALAQGEARQLRGRGRVYLGELRADQLAAHAVYID 353
           D+  + G+N+++   E    ALA G  + L+G   V + +L         + ID
Sbjct: 20  DAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTID 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,724
Number of Sequences: 2352
Number of extensions: 11092
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)