Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26a10
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.80 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   4.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.9  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +2

Query: 38  NTKVNRLVSDEKTIIKESSVLC 103
           N K++ L  D+++++KE++V C
Sbjct: 369 NMKISNLSFDKQSLLKENTVTC 390


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 44  KVNRLVSDEKTIIKESSVLCSVLCRGCRMDNYVYQV 151
           +VNRLV++ K I + +S   S     C +DN + ++
Sbjct: 95  QVNRLVNNCKDITESNSCKKSSKLLQCFIDNNLMKI 130


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 VYQVLPGKLRTSFAQPRRAGR 202
           VYQ +  + R S ++ RRA R
Sbjct: 307 VYQFIEERQRISLSKERRAAR 327


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 VYQVLPGKLRTSFAQPRRAGR 202
           VYQ +  + R S ++ RRA R
Sbjct: 307 VYQFIEERQRISLSKERRAAR 327


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 288 SSPSVHQHCSGHADTDANAS 229
           S+P  H H  GH  +  +A+
Sbjct: 410 STPGPHHHTMGHGHSHIHAT 429


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 VYQVLPGKLRTSFAQPRRAGR 202
           VYQ +  + R S ++ RRA R
Sbjct: 307 VYQFIEERQRISLSKERRAAR 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,546
Number of Sequences: 438
Number of extensions: 3404
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)