Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26a07
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 32 0.100
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.13
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 2.1
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 27 2.8
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 27 3.8
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 3.8
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 5.0
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 26 6.6
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 26 6.6
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 6.6
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 6.6
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 25 8.7
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 25 8.7
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 25 8.7
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 31.9 bits (69), Expect = 0.100
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 451 IGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKP-VQPVLKKSPLDMKLMEAMSL 627
I + VE L QSN N +++K + E HG+ ++ P P + P + S
Sbjct: 319 ITMVGVEPLYQSNGNEKSSKYNVFSESAHGNHQVLSFSPGSSPSFIEQPSPISPTSTTSE 378
Query: 628 DEFAITEKVDKKSLRY 675
D + E D +S+++
Sbjct: 379 DTNTLEEDTDDQSIKW 394
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.13
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQ-SNKNSETAKSSPSPERQHGDTKISKQK-P 567
+QK K K+D N+ TP + +E +K+ +++K P + G KI ++
Sbjct: 49 RQKQKNTKKDTLVNRETPSKKSQKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHK 108
Query: 568 VQPVLKKSPLDMKLMEAMSLDEFAITEKVDKKSLRYKSQKT 690
V+ V KSP KL+ ++ T+ D + L K T
Sbjct: 109 VKKV--KSPKKEKLVGKNPAEKEDTTDVEDTQKLEQKHSTT 147
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -3
Query: 566 GFCLDIFVSPCCRSGEGLDLAVSEFLLDCFKS----STESAPINGVILFVVPSCF 414
G C D +P GL L + E L+DCF + +TE IN + +PS F
Sbjct: 134 GLCYDS-CTPLANLAVGLSLNIQEVLIDCFATAACFTTEDTSINPIP--TLPSVF 185
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 400 KSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPV 579
K + TT+ +T + ++ +S NSE+A +S + +R T + + PV+ V
Sbjct: 980 KPESSLSSSTTSGLTS--SSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTV 1037
Query: 580 L 582
+
Sbjct: 1038 V 1038
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQK-PV 570
++ +KGE + K + DLK SN + ET+ S S + ++ +K + P
Sbjct: 107 RKHAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPK 166
Query: 571 QPVLKKSPLDMKLMEAMS 624
K LD+ ++ S
Sbjct: 167 NSKEIKKGLDLSKLDMTS 184
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 548 KYLNKNLFSLFSK 586
KYLN NLF+LFSK
Sbjct: 624 KYLNPNLFALFSK 636
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 307 ICHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQS 486
+ + C T + + +KT F +F+K K ++++G K+ + + + + L S
Sbjct: 138 VFNSCSPPKPTNPITIIDNDKTHSFKKFYKSLVKEDEENGIEKKINEAMNSSASQPLPNS 197
Query: 487 -NKNSETAKSSP 519
N S T S P
Sbjct: 198 TNFASTTFPSVP 209
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 451 IGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDM 603
+G L E + ++ N + ++S P+R+H K SK K P+D+
Sbjct: 1285 LGILKTE--RDTSTNRKQGQASKQPQRRHRKEKDSKVSESTAEFKSLPIDI 1333
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 5.0
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = +1
Query: 412 EKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKS 591
E++DG N L S + K+ + +ETAK + SP++ Q V+ + K+
Sbjct: 460 ERKDGLNNL---LFENKSGANTKEMSNGTETAKENCSPQQDSTSPTSGYQDLVKELAKEI 516
Query: 592 PLDMKLMEAMSLDEFAITEKVDKKSLRYKSQK 687
+ L + L + V + R KS++
Sbjct: 517 EMRKSLELKLKLSQSNKAGPVKHRKRRPKSKR 548
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 451 IGALSVEDLKQSNKNSETAK 510
+ A+SV+DLK+ NKN + K
Sbjct: 81 VDAMSVDDLKKLNKNKKLVK 100
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 265 FDITVRADDNLPKAICHDCLQQV 333
FDI V+ NL A CH C++ V
Sbjct: 443 FDILVKPQLNLLAAPCHQCVELV 465
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 451 IGALSVEDLKQSNKNSETAK 510
+ A+SV+DLK+ NKN + K
Sbjct: 81 VDAMSVDDLKKLNKNKKLVK 100
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQ 561
K K K +G NK+T S S + + S ER+H D+ S Q
Sbjct: 292 KDKKPSHKSNGRPNKLTAFFNKNSKASSISSAEEHPSNIDDSSIERRHYDSNHSSQ 347
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 8.7
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = +1
Query: 316 DCLQQVST-LHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNK 492
D ++++ T L EK +E K KSK K+ K L + + K
Sbjct: 141 DVIEKLQTSTPLLQYLAEKKNAVVE--KGKSKPSKKSVKAKKKLRLAEKPASNNSKAGKS 198
Query: 493 NSETAKSSPSPERQHG----DTKISKQKPVQPVLKKSPL 597
+ E+ KSS +P + K+S +K + KK+P+
Sbjct: 199 SQESKKSSKAPAESAAAVIKEDKVSDRKKSKKKPKKTPV 237
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 148 FGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVKRKLK 258
F ++ ++++ LS ++ LC ++ + NEVK L+
Sbjct: 330 FYDVHSLLLKNLSSKIKLCNHILMYQATFNEVKNFLQ 366
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 8.7
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVE-----DLKQSNKNSETAKSSPSPERQHGDTKISK 558
K + K D + TP + +E DL K S + + P+P+ + + K
Sbjct: 132 KDEVKTADADAAKDLSTPQDSSKPIEEKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPK 191
Query: 559 QKPV--QPVLKKSPLDMKLMEAMSLDEFAITEKVDKKSLR 672
KP +PV + P + S K+++ LR
Sbjct: 192 PKPAKSEPVKQSKPKATETARPSSFSRNEDRVKMNRMRLR 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,918,398
Number of Sequences: 5004
Number of extensions: 58379
Number of successful extensions: 202
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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