Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26a07
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein. 34 0.47
BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein. 34 0.47
AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein. 34 0.47
AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2 pro... 34 0.47
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 31 3.3
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 31 3.3
U86751-1|AAB68608.1| 510|Homo sapiens nucleolar fibrillar cente... 31 4.4
L40392-1|AAC41999.1| 273|Homo sapiens protein ( Homo sapiens (c... 31 4.4
EF560747-1|ABQ59057.1| 538|Homo sapiens TXNDC2 protein protein. 31 4.4
BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain cont... 31 4.4
BC038992-1|AAH38992.1| 510|Homo sapiens CD3e molecule, epsilon ... 31 4.4
AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein. 31 4.4
AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonse... 31 4.4
AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein. 31 4.4
AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredo... 31 4.4
AF017633-1|AAD41158.1| 512|Homo sapiens CD3e-associated protein... 31 4.4
M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein. 31 5.8
BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein. 31 5.8
AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein. 31 5.8
AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomoduli... 31 5.8
M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating horm... 30 7.7
BC026189-1|AAH26189.3| 357|Homo sapiens Sad1 and UNC84 domain c... 30 7.7
AF429967-1|AAP97300.1| 354|Homo sapiens hypothetical protein pr... 30 7.7
>BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 34.3 bits (75), Expect = 0.47
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 472 DLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEK 651
D + +KN+ + +R+H + I K +P L PLD +++++ L E I
Sbjct: 712 DYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI-LMERRIRPW 770
Query: 652 VDKKSLRYKSQKTGFL-PIIRTKIVXQNSPKA 744
++KK + Y ++ L + +K++ +SP++
Sbjct: 771 INKKIIEYIGEEEATLVDFVCSKVMAHSSPQS 802
>BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 34.3 bits (75), Expect = 0.47
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 472 DLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEK 651
D + +KN+ + +R+H + I K +P L PLD +++++ L E I
Sbjct: 712 DYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI-LMERRIRPW 770
Query: 652 VDKKSLRYKSQKTGFL-PIIRTKIVXQNSPKA 744
++KK + Y ++ L + +K++ +SP++
Sbjct: 771 INKKIIEYIGEEEATLVDFVCSKVMAHSSPQS 802
>AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein.
Length = 735
Score = 34.3 bits (75), Expect = 0.47
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 472 DLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEK 651
D + +KN+ + +R+H + I K +P L PLD +++++ L E I
Sbjct: 608 DYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI-LMERRIRPW 666
Query: 652 VDKKSLRYKSQKTGFL-PIIRTKIVXQNSPKA 744
++KK + Y ++ L + +K++ +SP++
Sbjct: 667 INKKIIEYIGEEEATLVDFVCSKVMAHSSPQS 698
>AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2
protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.47
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 472 DLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEK 651
D + +KN+ + +R+H + I K +P L PLD +++++ L E I
Sbjct: 657 DYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI-LMERRIRPW 715
Query: 652 VDKKSLRYKSQKTGFL-PIIRTKIVXQNSPKA 744
++KK + Y ++ L + +K++ +SP++
Sbjct: 716 INKKIIEYIGEEEATLVDFVCSKVMAHSSPQS 747
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 573
K K K + +DG S ++ +S ++S PE + +++K+K +
Sbjct: 745 KAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKK 804
Query: 574 PVLKKSPLDMKLMEAMSLDEF 636
++PL K + + LD+F
Sbjct: 805 TKQDRTPL-TKDVSLLDLDDF 824
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 573
K K K + +DG S ++ +S ++S PE + +++K+K +
Sbjct: 745 KAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKK 804
Query: 574 PVLKKSPLDMKLMEAMSLDEF 636
++PL K + + LD+F
Sbjct: 805 TKQDRTPL-TKDVSLLDLDDF 824
>U86751-1|AAB68608.1| 510|Homo sapiens nucleolar fibrillar center
protein protein.
Length = 510
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 573
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439
Query: 574 PVLKKSP 594
P+ + P
Sbjct: 440 PLEPELP 446
>L40392-1|AAC41999.1| 273|Homo sapiens protein ( Homo sapiens
(clone S164) mRNA, 3' end of cds. ).
Length = 273
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 472 DLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMSLDEFAITEK 651
D + +KN + +R+H + I K +P L PLD +++++ L E I
Sbjct: 146 DYGEDDKNXTKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI-LMERRIRPW 204
Query: 652 VDKKSLRYKSQKTGFL-PIIRTKIVXQNSPKA 744
++KK + Y ++ L + +K++ + P++
Sbjct: 205 INKKIIEYIGEEEATLVDXVCSKVMAHSXPQS 236
>EF560747-1|ABQ59057.1| 538|Homo sapiens TXNDC2 protein protein.
Length = 538
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +1
Query: 358 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 534
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249
Query: 535 -HGDTKISKQKPVQPVLKKSP 594
GD S KP+QP L P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270
>BC050132-1|AAH50132.1| 486|Homo sapiens thioredoxin domain
containing 2 (spermatozoa) protein.
Length = 486
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +1
Query: 358 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 534
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182
Query: 535 -HGDTKISKQKPVQPVLKKSP 594
GD S KP+QP L P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203
>BC038992-1|AAH38992.1| 510|Homo sapiens CD3e molecule, epsilon
associated protein protein.
Length = 510
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 573
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439
Query: 574 PVLKKSP 594
P+ + P
Sbjct: 440 PLEPELP 446
>AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein.
Length = 476
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 595 LDMKLMEAMSLDEFAITEKVDKKSLRYKSQKTG 693
LD K +E ++ EFA +K+ KK LR K KTG
Sbjct: 137 LDSKGLEYPAVVEFAPFQKIAKKKLRKKDAKTG 169
>AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 476
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 595 LDMKLMEAMSLDEFAITEKVDKKSLRYKSQKTG 693
LD K +E ++ EFA +K+ KK LR K KTG
Sbjct: 137 LDSKGLEYPAVVEFAPFQKIAKKKLRKKDAKTG 169
>AK097656-1|BAC05133.1| 553|Homo sapiens protein ( Homo sapiens
cDNA FLJ40337 fis, clone TESTI2032044, moderately
similar to THIOREDOXIN. ).
Length = 553
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +1
Query: 358 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 534
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249
Query: 535 -HGDTKISKQKPVQPVLKKSP 594
GD S KP+QP L P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270
>AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein.
Length = 452
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 595 LDMKLMEAMSLDEFAITEKVDKKSLRYKSQKTG 693
LD K +E ++ EFA +K+ KK LR K KTG
Sbjct: 113 LDSKGLEYPAVVEFAPFQKIAKKKLRKKDAKTG 145
>AF080095-1|AAK94950.1| 486|Homo sapiens sperm-specific thioredoxin
protein.
Length = 486
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +1
Query: 358 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 534
K E K E Q +G+ + + P +G ++ +K S SP Q
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182
Query: 535 -HGDTKISKQKPVQPVLKKSP 594
GD S KP+QP L P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203
>AF017633-1|AAD41158.1| 512|Homo sapiens CD3e-associated protein
protein.
Length = 512
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 394 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 573
K+ K ++QD T T ++G +DL+ + T K ER H T +P+Q
Sbjct: 387 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 441
Query: 574 PVLKKSP 594
P+ + P
Sbjct: 442 PLEPELP 448
>M77016-1|AAA61224.1| 359|Homo sapiens tropomodulin protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 478 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 624
KQ+ + + P + G + KQKP+ PVL+ L+ +L EA++
Sbjct: 73 KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
>BC002660-1|AAH02660.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 478 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 624
KQ+ + + P + G + KQKP+ PVL+ L+ +L EA++
Sbjct: 73 KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
>AL162385-1|CAI12854.1| 359|Homo sapiens tropomodulin 1 protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 478 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 624
KQ+ + + P + G + KQKP+ PVL+ L+ +L EA++
Sbjct: 73 KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
>AF288155-1|AAG30124.1| 359|Homo sapiens erythrocyte tropomodulin
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 478 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 624
KQ+ + + P + G + KQKP+ PVL+ L+ +L EA++
Sbjct: 73 KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
>M65085-1|AAA52477.1| 695|Homo sapiens follicle stimulating hormone
receptor protein.
Length = 695
Score = 30.3 bits (65), Expect = 7.7
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 130 KNRMNDFGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVK-RKLKRLFDITVRADDNLPKA 306
K + FG+LEKI + + + DV P +E++ K L IT A NLP
Sbjct: 63 KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYITPEAFQNLPN- 121
Query: 307 ICHDCLQQVSTLHLYAV-KVEKTQKFL 384
+ + + HL V K+ QK L
Sbjct: 122 LQYLLISNTGIKHLPDVHKIHSLQKVL 148
>BC026189-1|AAH26189.3| 357|Homo sapiens Sad1 and UNC84 domain
containing 1 protein.
Length = 357
Score = 30.3 bits (65), Expect = 7.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -2
Query: 261 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 91
P EFS+Y I ++ E I GQF YN +Q E+ H+V E K+ + N
Sbjct: 281 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 335
Query: 90 CT*PNFRCFF 61
P + C +
Sbjct: 336 WGHPKYTCLY 345
>AF429967-1|AAP97300.1| 354|Homo sapiens hypothetical protein
protein.
Length = 354
Score = 30.3 bits (65), Expect = 7.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -2
Query: 261 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 91
P EFS+Y I ++ E I GQF YN +Q E+ H+V E K+ + N
Sbjct: 278 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 332
Query: 90 CT*PNFRCFF 61
P + C +
Sbjct: 333 WGHPKYTCLY 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,264,003
Number of Sequences: 237096
Number of extensions: 1844685
Number of successful extensions: 4579
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4562
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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