Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26a01
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 30 1.6
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248... 29 2.1
12_02_0440 - 19109807-19110132,19110219-19110291,19110444-191105... 29 2.7
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 29 3.6
06_03_0518 - 21685950-21686221,21686768-21686882 29 3.6
10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617 28 4.8
04_03_0916 + 20794240-20794246,20794585-20796545 28 4.8
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 28 4.8
12_01_0619 - 5102970-5103750,5103825-5104065,5104794-5104797 28 6.3
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 27 8.4
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 27 8.4
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 27 8.4
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 179 QVRVDRVLDETNEGVTRRGAAGPCGRDLSQDAPVAAARQTXXGREQKANFSRET 340
++R V +ET + + RG P GRD AP+ ++ E ANFS++T
Sbjct: 498 ELRYLPVYEETYKSLKSRGVRFP-GRDNESLAPIFTPARSVAEAEVDANFSQQT 550
>01_02_0091 - 11023912-11024017,11024112-11024185,11024478-11024834,
11024938-11025166,11025468-11025559,11026099-11026326,
11027108-11027356,11027429-11027471,11027589-11027836,
11027922-11028035,11028122-11028322,11028417-11028593,
11028725-11028853,11029210-11029287,11029369-11029464,
11029563-11029634,11031549-11031677,11032105-11032220,
11033048-11033204,11033343-11033426,11033513-11033574,
11034901-11035067,11035162-11035226,11035315-11035371,
11035547-11035633,11036638-11036703,11036810-11036908
Length = 1193
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 126 KRYKQIQSEGKDPSKHDFKSEWIVFWTKRMKELHDEELQVRVDEIYRRMRLSPPPVKP 299
K Q++S G H F+SE + + ++H L+ + +E + + L+P PV P
Sbjct: 1087 KHLVQLRS-GLPSHTHRFESEIVEVDLDKQPQIHVGPLKYKTEERHHKQELTPAPVFP 1143
>12_02_0440 -
19109807-19110132,19110219-19110291,19110444-19110586,
19110787-19111002,19111072-19111387,19111474-19111884,
19113979-19114005
Length = 503
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 257 DLSQDAPVAAARQTXXGREQKANFSRETKTSGEEKVEVARQKTSKKXISRG 409
DL+ D P+ A+ Q+ + N R+T ++ + E R+K K+ G
Sbjct: 441 DLNNDDPITASEQSKVEVSNQLNQRRQTVSTSRKPPEDKREKNPKRHKQNG 491
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDP 164
+ K+Q + EKTL+ H+K EK P KK + ++ SE K P
Sbjct: 617 EDKQQTHDRPEKTLKNHKKG-EKKRNGPGSGKKETHNEKEEPTSEKKQP 664
>06_03_0518 - 21685950-21686221,21686768-21686882
Length = 128
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 265 AGCACRRRPSNPXRQRAKSEFLPRNK-DLRRREGRGRP 375
AGCAC R P R + L K DL RR +G P
Sbjct: 12 AGCACLRASGRPGAVRPRRRELGLGKVDLARRRRQGLP 49
>10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617
Length = 174
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 111 KKFWNKRYKQIQSEGKDPSKH 173
++ W++R+KQ+ S G D +KH
Sbjct: 70 RRRWHRRHKQVSSTGYDGNKH 90
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 257 LVHTDLQLLVV*LLHSFRPEHDPLGLEVVLGRIFSLAL 144
++H D++ + L HSF P+ G+ +LGR FS L
Sbjct: 468 IIHCDIKPENILLDHSFSPKIADFGMAKLLGRDFSRVL 505
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 6 ALAEDQKRQAEESAEKTLRYHEKNPEKHPLYPEE 107
+L E R+ E+ ++ RY K+P++HP +PE+
Sbjct: 112 SLVEFMVRETEKLHQQVGRY--KSPDEHPFFPED 143
>12_01_0619 - 5102970-5103750,5103825-5104065,5104794-5104797
Length = 341
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 12 AEDQKRQAEESAE-----KTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKH 173
AE K EE + KT+ EK+ KH E +K N+R K + SE K ++H
Sbjct: 197 AEHHKNMLEEEKDNNKRLKTMLVEEKDKNKHHKIILEEEKDKNERLKTMLSEEKVKNEH 255
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 51 KTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKH 173
KT+ EK+ +H E +K NKR K + E KD +KH
Sbjct: 187 KTMLAKEKDKAEHHKNMLEEEKDNNKRLKTMLVEEKDKNKH 227
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = +3
Query: 159 DPS--KHDFKSEWIVFWTK---RMKELHDEELQVRVDEIYRRMR 275
DP+ KH + E + + K +MK HD LQ + +EI+R R
Sbjct: 608 DPTVLKHMDRDELVAHFNKMMNQMKRQHDSTLQEKTEEIFRLKR 651
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 30 QAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFKSEWIVFWTK 209
QA + R HE E H Y +EW+ + + +SE DPS ++ W T+
Sbjct: 1459 QALHRISRRGREHENWEETHHEYIQEWEARRQRIFP--ESEQYDPSSYEEYLHWYSGVTR 1516
Query: 210 R 212
R
Sbjct: 1517 R 1517
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 15 EDQKRQAEESAEKTLRYHEKNPEKHPLYPEEW 110
++ R+ + A+K + H K EK P P EW
Sbjct: 26 KEHHRKKRKEAKKEGKSHRKKVEKDPGIPNEW 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,684,077
Number of Sequences: 37544
Number of extensions: 207377
Number of successful extensions: 946
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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