BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26a01
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 30 1.4
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 30 1.4
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 29 1.9
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 29 1.9
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 29 1.9
AL117203-15|CAD57713.2| 670|Caenorhabditis elegans Hypothetical... 29 3.2
AL117203-14|CAD57712.2| 587|Caenorhabditis elegans Hypothetical... 29 3.2
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 28 5.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.7
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 5.7
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 28 5.7
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 28 5.7
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 27 7.5
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 27 7.5
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 27 7.5
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 9.9
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/85 (24%), Positives = 31/85 (36%)
Frame = +2
Query: 209 TNEGVTRRGAAGPCGRDLSQDAPVAAARQTXXGREQKANFSRETKTSGEEKVEVARQKTS 388
T+E T GAAGP R P ++ R+ K + +T + V A ++
Sbjct: 860 TDEPSTSSGAAGPSNRPPHSPTPPPGNKRRRVDRKPKTEEPEQMETEPVDPVHRAPKRRG 919
Query: 389 KKXISRGETKVARLPTXDPRLQTRL 463
S + R QTRL
Sbjct: 920 TSAASSSSNGMPSSSAPTTRSQTRL 944
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/85 (24%), Positives = 31/85 (36%)
Frame = +2
Query: 209 TNEGVTRRGAAGPCGRDLSQDAPVAAARQTXXGREQKANFSRETKTSGEEKVEVARQKTS 388
T+E T GAAGP R P ++ R+ K + +T + V A ++
Sbjct: 860 TDEPSTSSGAAGPSNRPPHSPTPPPGNKRRRVDRKPKTEEPEQMETEPVDPVHRAPKRRG 919
Query: 389 KKXISRGETKVARLPTXDPRLQTRL 463
S + R QTRL
Sbjct: 920 TSAASSSSNGMPSSSAPTTRSQTRL 944
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 146 ERGKRSVQARLQVRVDRVLDETNEGVTRRGAAGPCG 253
+R R + R+ V +R+L E GAAGPCG
Sbjct: 161 DRECREIWKRIGVSSNRILPFVAENFWEMGAAGPCG 196
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFK 182
+QK A+++AEK R E +K EE K+ W ++IQ E ++ + D K
Sbjct: 89 EQKVNAKKAAEKEARRAEAEAKKRAAQEEEHKQ-WKAEQERIQKE-QEKKEADLK 141
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Frame = +3
Query: 96 YPEEWKKFWNKRYKQIQSEGKDPSKHDFKSEWIVFWTKRMKELHDEELQVRVDEI----Y 263
YP E K + K +H K EW W + K +H L V +D + Y
Sbjct: 378 YPLEGCKHGDLHIKATWMNLSTELRHLEKQEWEAEWGQADKPIHSALLMVYIDSVADLPY 437
Query: 264 RRMRLSPPP 290
+ +L P P
Sbjct: 438 PKSKLEPSP 446
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 146 ERGKRSVQARLQVRVDRVLDETNEGVTRRGAAGPCG 253
+R R + R+ V +R+L E GAAGPCG
Sbjct: 161 DRECREIWKRIGVSSNRILPFVAENFWEMGAAGPCG 196
>AL117203-15|CAD57713.2| 670|Caenorhabditis elegans Hypothetical
protein Y48C3A.5b protein.
Length = 670
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 408 VKRRSPVSRRXTPDYKRDYXRERMI 482
+KRR+PV+ PD+KR++ R ++
Sbjct: 81 LKRRNPVTTTVNPDFKREHIRSVVV 105
>AL117203-14|CAD57712.2| 587|Caenorhabditis elegans Hypothetical
protein Y48C3A.5a protein.
Length = 587
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 408 VKRRSPVSRRXTPDYKRDYXRERMI 482
+KRR+PV+ PD+KR++ R ++
Sbjct: 81 LKRRNPVTTTVNPDFKREHIRSVVV 105
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 ALAEDQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFKS 185
ALA+ K ++ ++ + +++ PE+ P + KFW+ ++++ P+ + K
Sbjct: 1521 ALADSNKHRSASNSSLHMLGYDEEPEEIDAAPVKPTKFWDGFAQKVKESVMGPNNNILKC 1580
Query: 186 EWIVFWTKRMKE--LHDEELQVRVDEI 260
+ K+ KE L EE++ R+ ++
Sbjct: 1581 PY-----KKHKESPLTAEEMRHRIKDV 1602
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 ALAEDQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFKS 185
ALA+ K ++ ++ + +++ PE+ P + KFW+ ++++ P+ + K
Sbjct: 1521 ALADSNKHRSASNSSLHMLGYDEEPEEIDAAPVKPTKFWDGFAQKVKESVMGPNNNILKC 1580
Query: 186 EWIVFWTKRMKE--LHDEELQVRVDEI 260
+ K+ KE L EE++ R+ ++
Sbjct: 1581 PY-----KKHKESPLTAEEMRHRIKDV 1602
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 18 DQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKDPSKHDFKSEWIV 197
D ++AE++A+ +YH++ +KH E KK K+ E D H + +
Sbjct: 186 DTHKKAEQNAQDNQKYHDEERKKH---IETQKKAEENEEKRRAKEKADRDAHVARHKQAE 242
Query: 198 FWTKRMKELHDEE 236
K+ +E +++
Sbjct: 243 ALEKKKREQEEKQ 255
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 311 EQKANFSRETKT-SGEEKVEVARQKTSKKXI 400
E+ F E KT +GE+ V+V + TSKK I
Sbjct: 13109 EESVKFGEEKKTKAGEKTVQVESEPTSKKTI 13139
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 311 EQKANFSRETKT-SGEEKVEVARQKTSKKXI 400
E+ F E KT +GE+ V+V + TSKK I
Sbjct: 13109 EESVKFGEEKKTKAGEKTVQVESEPTSKKTI 13139
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 15 EDQKRQAEESAEKTLRYHEKNPEK--HPLYPEEWKKFWNKRYKQIQSEGKDPSK 170
E +K+ E++ EK + H K P+K P + +K K ++++ + K P K
Sbjct: 1434 EAKKKAVEKAKEKEKKEHRKEPKKANEPGPAPKSEKAVEKAVEKVEKKPKSPQK 1487
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 93 LYPEEWKKFWNKRYKQIQSEGKDPSKHD 176
+Y + FW +R+ ++ SEG+ P+K D
Sbjct: 93 VYKDFCPGFWTERWDELLSEGRFPAKFD 120
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +3
Query: 27 RQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYK 137
R+ + +T+ ++EKN EK + +++ KF+N++++
Sbjct: 37 RKNSKKKLETIIFYEKNVEKTLFFTKQYFKFFNEKFQ 73
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 271 CACRRRPSNPXRQRAKSEFLPRNKDLRRREGRGR 372
CA +RP+N + + ++ ++ RRR GR R
Sbjct: 22 CATAKRPANQRKSQRSTKSRKSSRRSRRRNGRSR 55
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 374 RQKTSKKXISRGETKVARLPTXDPRLQTRLXEGTDDIG 487
RQK+S + + + ++RLP+ DP +T + G ++G
Sbjct: 144 RQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVG 181
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 374 RQKTSKKXISRGETKVARLPTXDPRLQTRLXEGTDDIG 487
RQK+S + + + ++RLP+ DP +T + G ++G
Sbjct: 144 RQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVG 181
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 144 QSEGKDPSKHDFKSEWIVFWTKRMKELHDEELQVRVDEIYR 266
++EGK K+ W+ +R+ E EEL + DEI +
Sbjct: 456 KTEGKKLRTMQRKNTWLTASIRRLSEQRREELAAKKDEILK 496
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 AALAEDQKRQAEESAEKTLRYHEKNPEKHPLYPEEWKKFWNKRYKQIQSEGKD--PSKHD 176
A LAE Q ++ + K PEK P++PE+ K F K + + +D P+ +
Sbjct: 83 AGLAEFQLDPSKLCQLSSSTKLSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQDYYPTDDE 142
Query: 177 FKSE 188
SE
Sbjct: 143 SSSE 146
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 222 LHDEELQVRV-DEIYRRMRLSPPPVKPXXAESKK 320
LHDE++ + + I R + SPPP+K A + K
Sbjct: 1500 LHDEDIPLHMAPTILRHPQPSPPPIKKSAASNYK 1533
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,238,289
Number of Sequences: 27780
Number of extensions: 159143
Number of successful extensions: 777
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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