Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25p19
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0252 - 16191136-16191279,16191639-16191750,16191833-161919...    27   9.4  
03_06_0713 - 35687672-35689219                                         27   9.4  

>10_08_0252 -
           16191136-16191279,16191639-16191750,16191833-16191924,
           16192564-16192641,16192764-16192796,16193712-16193771,
           16193912-16193999,16194155-16194180
          Length = 210

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 112 KCNTFYRLES*DFFRIVNVTQNG-PIHLSCYNKWNSHHH 225
           KCN F      D  + ++V   G  IHL C N   +HHH
Sbjct: 88  KCNFFDDDYLFDSTKDISVLHCGHTIHLECLNVMRAHHH 126


>03_06_0713 - 35687672-35689219
          Length = 515

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 373 VPSSIRSHPRPLIPNSLYSTGSSIPLDNSP 284
           V S + SHPR L P+ L S  +++PL  SP
Sbjct: 58  VLSDLGSHPRLLTPDLLDSLLAALPLHPSP 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,102,344
Number of Sequences: 37544
Number of extensions: 141262
Number of successful extensions: 269
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)