Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25p16
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353705-5|CAI40237.1|  689|Homo sapiens centrosomal protein 78k...    54   7e-07
AK022705-1|BAB14190.1|  665|Homo sapiens protein ( Homo sapiens ...    54   7e-07
BC128058-1|AAI28059.1|  722|Homo sapiens CEP78 protein protein.        52   2e-06
Y16794-1|CAA76390.2|  456|Homo sapiens type I hair keratin 8 pro...    33   0.75 
BC131715-1|AAI31716.1|  456|Homo sapiens keratin 38 protein.           33   0.75 
AJ786656-1|CAH10351.1|  439|Homo sapiens hHa8 protein protein.         33   0.75 

>AL353705-5|CAI40237.1|  689|Homo sapiens centrosomal protein 78kDa
           protein.
          Length = 689

 Score = 53.6 bits (123), Expect = 7e-07
 Identities = 43/165 (26%), Positives = 68/165 (41%)
 Frame = +3

Query: 189 SSRIFQQCYAKCCKLQNFTPLNNVLPTGNGKILDFCVDRIKYADWPPILNALSCDLSLHS 368
           S+  F   Y   C LQN  PL  V       +LDF  DR++  DW P+L+ L  +  L  
Sbjct: 11  SAADFFSHYEYLCALQNSVPLPAVRACLREGVLDFNADRLRGVDWAPLLSTLKINKDLPL 70

Query: 369 ISIRCRQPVKTVLEQIDCDRLAKTVNKRAVILTNFMLNNLVEAIXXXXXXXXXXXXXXVE 548
           +SI+     +  L     D      ++   I    +   L +A+              + 
Sbjct: 71  VSIKSF--FQPWLGDTGSDMNKFCRSRVPAIRYKDVTFQLCKALKGCLSISSVLKNLELN 128

Query: 549 GLPLKIPYLNPLCEAVLLNSSLQHLYFQRCLLGDAGCLAICKAVR 683
           GL L+   L  L + +  ++SL HL    C +GD G   IC+ ++
Sbjct: 129 GLILRERDLTILAKGLNKSASLVHLSLANCPIGDGGLEIICQGIK 173


>AK022705-1|BAB14190.1|  665|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12643 fis, clone NT2RM4001969, moderately
           similar to R.norvegicus mRNA for IP63 protein. ).
          Length = 665

 Score = 53.6 bits (123), Expect = 7e-07
 Identities = 43/165 (26%), Positives = 68/165 (41%)
 Frame = +3

Query: 189 SSRIFQQCYAKCCKLQNFTPLNNVLPTGNGKILDFCVDRIKYADWPPILNALSCDLSLHS 368
           S+  F   Y   C LQN  PL  V       +LDF  DR++  DW P+L+ L  +  L  
Sbjct: 11  SAADFFSHYEYLCALQNSVPLPAVRACLREGVLDFNADRLRGVDWAPLLSTLKINKDLPL 70

Query: 369 ISIRCRQPVKTVLEQIDCDRLAKTVNKRAVILTNFMLNNLVEAIXXXXXXXXXXXXXXVE 548
           +SI+     +  L     D      ++   I    +   L +A+              + 
Sbjct: 71  VSIKSF--FQPWLGDTGSDMNKFCRSRVPAIRYKDVTFQLCKALKGCLSISSVLKNLELN 128

Query: 549 GLPLKIPYLNPLCEAVLLNSSLQHLYFQRCLLGDAGCLAICKAVR 683
           GL L+   L  L + +  ++SL HL    C +GD G   IC+ ++
Sbjct: 129 GLILRERDLTILAKGLNKSASLVHLSLANCPIGDGGLEIICQGIK 173


>BC128058-1|AAI28059.1|  722|Homo sapiens CEP78 protein protein.
          Length = 722

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 43/165 (26%), Positives = 67/165 (40%)
 Frame = +3

Query: 189 SSRIFQQCYAKCCKLQNFTPLNNVLPTGNGKILDFCVDRIKYADWPPILNALSCDLSLHS 368
           S+  F   Y   C LQN  PL  V       +LDF  D ++  DW P+L+ L  +  L  
Sbjct: 11  SAADFFSHYEYLCALQNSVPLPAVRACLREGVLDFNADGLRGVDWAPLLSTLKINKDLPL 70

Query: 369 ISIRCRQPVKTVLEQIDCDRLAKTVNKRAVILTNFMLNNLVEAIXXXXXXXXXXXXXXVE 548
           +SI+     +  L     D      ++   I    +   L +A+              + 
Sbjct: 71  VSIKSF--FQPWLGDTGSDMNKFCRSRVPAIRYKDVTFQLCKALKGCLSISSVLKNLELN 128

Query: 549 GLPLKIPYLNPLCEAVLLNSSLQHLYFQRCLLGDAGCLAICKAVR 683
           GL L+   L  L + +  ++SL HL    C +GD G   IC+ +R
Sbjct: 129 GLILRERDLTILAKGLNKSASLVHLSLANCPIGDGGLEIICQGIR 173


>Y16794-1|CAA76390.2|  456|Homo sapiens type I hair keratin 8
           protein.
          Length = 456

 Score = 33.5 bits (73), Expect = 0.75
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 699 GRSADIGPLCRLPNIPHLRASIVGSTSVGGNCLKGPP 589
           G  A+I P+C L N+ H     VGST +G   L  PP
Sbjct: 35  GAEANIAPMCLLANVAHANRVRVGSTPLGRPSLCLPP 71


>BC131715-1|AAI31716.1|  456|Homo sapiens keratin 38 protein.
          Length = 456

 Score = 33.5 bits (73), Expect = 0.75
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 699 GRSADIGPLCRLPNIPHLRASIVGSTSVGGNCLKGPP 589
           G  A+I P+C L N+ H     VGST +G   L  PP
Sbjct: 35  GAEANIAPMCLLANVAHANRVRVGSTPLGRPSLCLPP 71


>AJ786656-1|CAH10351.1|  439|Homo sapiens hHa8 protein protein.
          Length = 439

 Score = 33.5 bits (73), Expect = 0.75
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 699 GRSADIGPLCRLPNIPHLRASIVGSTSVGGNCLKGPP 589
           G  A+I P+C L N+ H     VGST +G   L  PP
Sbjct: 18  GAEANIAPMCLLANVAHANRVRVGSTPLGRPSLCLPP 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,642,827
Number of Sequences: 237096
Number of extensions: 2057149
Number of successful extensions: 4021
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4021
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)