Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25p16
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077539-2|AAK84579.2|  427|Caenorhabditis elegans Hypothetical ...    31   0.61 
Z47812-4|CAA87791.1|  436|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical ...    28   5.7  
U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    28   7.5  
U80843-12|AAB37961.2|  317|Caenorhabditis elegans Hypothetical p...    27   9.9  

>AF077539-2|AAK84579.2|  427|Caenorhabditis elegans Hypothetical
           protein T25D3.3 protein.
          Length = 427

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 205 WNIRLLFGSTPLPTMFKNHQKNIRSIFKNHSFSLRRAILKMYN 77
           W+ R L GSTP+  +      ++R +FKN S SL  ++   Y+
Sbjct: 56  WSERNLMGSTPIHVIDPPGLPSVRLVFKNESASLTGSLKHRYS 98


>Z47812-4|CAA87791.1|  436|Caenorhabditis elegans Hypothetical
           protein T05H10.4 protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 472 KLVKITARLFTVF-ASRSQSICSSTVFTGCLHRIEIECRLKSQLK 341
           K  +  A LF+V+ A R+        +  CLHR++ +CR + + K
Sbjct: 166 KFAEYEALLFSVYVAERTDRKYDGWTYFDCLHRLQSKCRYRVRAK 210


>Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical
           protein F48F5.4 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 528 IGSYWTRVGISLRRDYSA*NWLKSQLVCLQFLL 430
           +GSYW    + + + +S+ N  K  LV L+FL+
Sbjct: 204 VGSYWRYQAMKILKTHSSSNTSKGTLVLLRFLI 236


>AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical
           protein Y54E5B.2 protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 159 SKIIKKTFVRSSRITVSRFEERY*KCTINK 70
           SKI +K  +    IT ++F+E+Y KC  N+
Sbjct: 17  SKIAEKHLLSGKIITCAKFDEKYSKCAENQ 46


>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  RIFNNKIKFIYCTFLISLFE 105
           R+FN  + +I CT L+  FE
Sbjct: 58  RVFNRNLNYILCTILLQFFE 77


>U80843-12|AAB37961.2|  317|Caenorhabditis elegans Hypothetical
           protein C32B5.5 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 463 KITARLFTVFASRSQSICSSTVFTGCLHRIEIECRLKSQLK 341
           +I   +  VF SRS S  SS +   CL    I+   KS LK
Sbjct: 133 RINVNVLEVFDSRSLSAASSLIANSCLPLSLIKLPFKSLLK 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,165,722
Number of Sequences: 27780
Number of extensions: 350194
Number of successful extensions: 915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)