Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25p04
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 103 2e-23
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 31 0.18
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 26 3.9
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 6.8
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 6.8
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 25 6.8
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 25 6.8
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 6.8
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 6.8
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 25 9.0
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 25 9.0
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 9.0
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 9.0
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 103 bits (248), Expect = 2e-23
Identities = 57/145 (39%), Positives = 79/145 (54%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 374
+R I+DK+AS+VARNGP FE +IRQNE N KF FL++ DPYH YYQHK+ E +EGK+
Sbjct: 41 IREIIDKSASYVARNGPAFEEKIRQNEQANTKFAFLHANDPYHPYYQHKLTEAREGKLKS 100
Query: 375 PTAPPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISALEL 554
A + ++ L + F PSIS+L+L
Sbjct: 101 H---------------ATGLSTQKTSTLARPIQKPIEATIPAPSPYLFSEPLPSISSLDL 145
Query: 555 DIVKLTAQFVARNGRQFLTDLMKKE 629
D+++LTA++ A G FL L +KE
Sbjct: 146 DVLRLTARYAAVRGSSFLVSLSQKE 170
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 30.7 bits (66), Expect = 0.18
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 203 ISDFRWWINNANDWRGWWRRIFRDL 129
IS F+W NN NDW + FRD+
Sbjct: 189 ISKFKWDSNNNNDWSSLMKDCFRDV 213
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 602 LTTVSGDKLRG*FHYVELQSRYRRWISDKFE 510
L +V+ + L+ F +E R+W+ DKFE
Sbjct: 95 LKSVNEENLKKFFSELENHGNIRQWLKDKFE 125
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.4 bits (53), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 404 TATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRI-YR*STVYIGSG 550
T T + SS S PPA AP+ + + T++ + T + + VY+G G
Sbjct: 1289 TTTQEASSSASVPPAIAPESANAALTSTIDKTTGAPELAQKKYKVYVGQG 1338
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 276 LGNPKFNFLNSGDPYHAYYQHKV 344
L FN+ NS DP H +Y+ ++
Sbjct: 119 LSQTLFNYANSKDPLHIWYKARL 141
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 283 IQSSTSLIQGIPTMLTISIKSERSKREK--FPNQLHHQLCHQDSNEWV 420
I + S++ IP +++ KSE +K ++ + LHH L N+W+
Sbjct: 1164 IDADESVLHDIPAYESLN-KSESNKYQEQAYSTPLHHTLNVLPKNKWI 1210
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 401 RTATNGSRSSHSGPPAGAPQGSCSC 475
R A N + PA P GSCSC
Sbjct: 187 RGAVNRGVNLSEARPAAQPSGSCSC 211
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 428 SHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGS 547
SH G A AP S A + RP +R + TVY S
Sbjct: 366 SHGGTSAAAPLASAVYALALSIRPDLSWRDIQHITVYSAS 405
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +3
Query: 273 ELGNPKFNFLNSGDPYHAY 329
++G+ KF++LN+ +PY A+
Sbjct: 168 DIGSSKFSYLNAKNPYPAW 186
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 281 AQLILSDPSFKFRTITSHKAGSFINNISDFRWWINNANDWRGWWRR 144
AQ L DP S+ G F+ ++ R + + +D R +W R
Sbjct: 192 AQSKLEDPDLAHSQAISNSLGLFLQKVNIIRDYREDFDDNRHFWPR 237
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 596 TVSGDKLRG*FHYVELQSRYRRWISD 519
T SG ++ +H+ E ++RYR+ ++D
Sbjct: 155 TRSGIRVHHLYHWAEFEARYRKNVAD 180
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 282 NPKFNFLNSGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGL 422
+P N + Y Y YQH + E +P PT+ M G + G+
Sbjct: 741 SPTSNMPQAFQAYSQYPYQHPPFPLSEQMLPLPTSGVMMAPGAAKSGM 788
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 496 THHQISNLSLIHRLYRLWSS 555
THH I L+H + ++WS+
Sbjct: 2057 THHWILRACLVHGIQQIWSA 2076
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,399,350
Number of Sequences: 5004
Number of extensions: 44083
Number of successful extensions: 162
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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