Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25p04
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 115 2e-26
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 115 2e-26
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 44 9e-05
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 38 0.006
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 38 0.006
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 38 0.006
U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein. 38 0.006
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 38 0.006
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 2.1
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 2.1
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 2.1
Z81517-5|CAB04212.1| 685|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 3.6
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 3.6
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 28 6.3
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 28 6.3
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 28 6.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.4
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 115 bits (277), Expect = 2e-26
Identities = 62/145 (42%), Positives = 83/145 (57%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 374
+R IVDKTA F A+NG +FE +IR+ E NPKFNFL+ DPYHAYY+ V + EG+V
Sbjct: 34 IRTIVDKTARFAAKNGVDFENKIREKEAKNPKFNFLSITDPYHAYYKKMVYDFSEGRVEA 93
Query: 375 PTAPPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISALEL 554
P P + ++ P+ +EF ADP +I+A +L
Sbjct: 94 PKVPQAVKEHVKKAEFVPSA---------------------PPPAYEFSADPSTINAYDL 132
Query: 555 DIVKLTAQFVARNGRQFLTDLMKKE 629
D+++L A FVARNGRQFLT LM +E
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTRE 157
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 201 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVP 371
+++ A FVARNG +F ++ E N +F+FL Y+ V + ++ VP
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLVDQYQKVLVP 189
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 115 bits (277), Expect = 2e-26
Identities = 62/145 (42%), Positives = 83/145 (57%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 374
+R IVDKTA F A+NG +FE +IR+ E NPKFNFL+ DPYHAYY+ V + EG+V
Sbjct: 34 IRTIVDKTARFAAKNGVDFENKIREKEAKNPKFNFLSITDPYHAYYKKMVYDFSEGRVEA 93
Query: 375 PTAPPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISALEL 554
P P + ++ P+ +EF ADP +I+A +L
Sbjct: 94 PKVPQAVKEHVKKAEFVPSA---------------------PPPAYEFSADPSTINAYDL 132
Query: 555 DIVKLTAQFVARNGRQFLTDLMKKE 629
D+++L A FVARNGRQFLT LM +E
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTRE 157
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 201 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVP 371
+++ A FVARNG +F ++ E N +F+FL Y+ V + ++ VP
Sbjct: 133 DLIRLVALFVARNGRQFLTQLMTREARNYQFDFLKPAHCNFTYFTKLVDQYQKVLVP 189
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGKVPE 374
++D+ A +V GP+FEA I E NP F FL ++ H YY+ ++ + +G E
Sbjct: 367 VMDRMAVYVVTEGPQFEAMICAEEFQNPMFQFLWDNTSALHVYYRWRIYSLLQGDTIE 424
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGN-PKFNFLNSG---DPYHAYYQHKVREIK 356
+ +I++KTASF+ NG + E I+ + N +F FL +P++ Y Q +RE K
Sbjct: 79 LHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKK 136
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVR 347
I++ A VA+ G E EA + E + + +F+ PY++YY HKVR
Sbjct: 307 ILNSYAEHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKVR 352
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGN-PKFNFLNSG---DPYHAYYQHKVREIK 356
+ +I++KTASF+ NG + E I+ + N +F FL +P++ Y Q +RE K
Sbjct: 163 LHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKK 220
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVR 347
I++ A VA+ G E EA + E + + +F+ PY++YY HKVR
Sbjct: 391 ILNSYAEHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKVR 436
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGN-PKFNFLNSG---DPYHAYYQHKVREIK 356
+ +I++KTASF+ NG + E I+ + N +F FL +P++ Y Q +RE K
Sbjct: 167 LHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKK 224
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVR 347
I++ A VA+ G E EA + E + + +F+ PY++YY HKVR
Sbjct: 395 ILNSYAEHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKVR 440
>U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein.
Length = 551
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGN-PKFNFLNSG---DPYHAYYQHKVREIK 356
+ +I++KTASF+ NG + E I+ + N +F FL +P++ Y Q +RE K
Sbjct: 163 LHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKK 220
Score = 34.3 bits (75), Expect = 0.073
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKV 344
I++ A VA+ G E EA + E + + +F+ PY++YY HKV
Sbjct: 391 ILNSYAEHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKV 435
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 195 VRNIVDKTASFVARNGPEFEARIRQNELGN-PKFNFLNSG---DPYHAYYQHKVREIK 356
+ +I++KTASF+ NG + E I+ + N +F FL +P++ Y Q +RE K
Sbjct: 163 LHHIIEKTASFIVANGTQMEIVIKAKQRNNAEQFGFLEFDHRLNPFYKYLQKLIREKK 220
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 204 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVR 347
I++ A VA+ G E EA + E + + +F+ PY++YY HKVR
Sbjct: 391 ILNSYAEHVAQRGLEAEASLAARE--DLQLHFMEPKSPYYSYYHHKVR 436
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 404 TATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGSGARHSEINRAIC 583
+A++ S SS S P G P G SC+++ T + R+ + I SG +S I+
Sbjct: 2 SASSTSSSSTSCPEGGEPSG--SCKSSDEGESTLKKRMQQ---YGIASGYANSSISTLDR 56
Query: 584 RQKRSSVLNG 613
Q +S LNG
Sbjct: 57 SQYQSLPLNG 66
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 404 TATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGSGARHSEINRAIC 583
+A++ S SS S P G P G SC+++ T + R+ + I SG +S I+
Sbjct: 2 SASSTSSSSTSCPEGGEPSG--SCKSSDEGESTLKKRMQQ---YGIASGYANSSISTLDR 56
Query: 584 RQKRSSVLNG 613
Q +S LNG
Sbjct: 57 SQYQSLPLNG 66
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 404 TATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGSGARHSEINRAIC 583
+A++ S SS S P G P G SC+++ T + R+ + I SG +S I+
Sbjct: 2 SASSTSSSSTSCPEGGEPSG--SCKSSDEGESTLKKRMQQ---YGIASGYANSSISTLDR 56
Query: 584 RQKRSSVLNG 613
Q +S LNG
Sbjct: 57 SQYQSLPLNG 66
>Z81517-5|CAB04212.1| 685|Caenorhabditis elegans Hypothetical
protein F28B1.5 protein.
Length = 685
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -2
Query: 224 AGSFINNISDFRWWIN 177
A + +NNISD++WW+N
Sbjct: 657 ATTALNNISDWQWWVN 672
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 380 CTTNYAIRTATNGSRSSHSGPPAGAPQGSCSCRTASAARPTT 505
CT IR + S + G P P GS C + P+T
Sbjct: 825 CTNTNVIRCPSGSSVFEYGGRPLACPAGSNKCPQGYSCMPST 866
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 344 QRDQRGK-SSRTNCTTNYAIRTATNGSR----SSHSGPPAGAPQGSCSCRTAS 487
QRD+ G +S T+C + + NG + +S+ G G P G+ C+T+S
Sbjct: 59 QRDEGGYCNSNTDCRSGLYCTASVNGVKICLSTSNGGGGNGFPSGNGGCQTSS 111
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 344 QRDQRGK-SSRTNCTTNYAIRTATNGSR----SSHSGPPAGAPQGSCSCRTAS 487
QRD+ G +S T+C + + NG + +S+ G G P G+ C+T+S
Sbjct: 59 QRDEGGYCNSNTDCRSGLYCTASVNGVKICLSTSNGGGGNGFPSGNGGCQTSS 111
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 281 AQLILSDPSFKFRTITSHKAGSFINNISDFRWWINNANDWRG 156
A I+++P FR ITS A S +DF + N ND+ G
Sbjct: 699 ASNIVNNPDALFRPITSDDAVSNWQATNDFSTYSPNPNDYGG 740
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 281 AQLILSDPSFKFRTITSHKAGSFINNISDFRWWINNANDWRG 156
A I+++P FR ITS A S +DF + N ND+ G
Sbjct: 699 ASNIVNNPDALFRPITSDDAVSNWQATNDFSTYSPNPNDYGG 740
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 281 AQLILSDPSFKFRTITSHKAGSFINNISDFRWWINNANDWRG 156
A I+++P FR ITS A S +DF + N ND+ G
Sbjct: 699 ASNIVNNPDALFRPITSDDAVSNWQATNDFSTYSPNPNDYGG 740
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 365 SSRTNCTTNYAIRTATNGSRSSHSGPPAGAPQGSCSCRTASAARPTT 505
+S ++ T + TA N + SS SGP QGS S +T S TT
Sbjct: 1568 TSGSSSTQSIPSSTAAN-TGSSTSGPTVATTQGSSSTQTNSNTGSTT 1613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,568,889
Number of Sequences: 27780
Number of extensions: 263568
Number of successful extensions: 975
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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