Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25o15
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z95559-15|CAB63361.1|  917|Caenorhabditis elegans Hypothetical p...    28   7.8  

>AC024845-3|AAF60852.1|  619|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.2 protein.
          Length = 619

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
 Frame = +1

Query: 532 IIELEAV--LLQTVKNIHP--VTGLAPALIRTLVINTEGTLNLVILPH 663
           I EL+ V  L Q V +++   +T + PA IR L ++ EGTL L+  PH
Sbjct: 307 IYELQPVPLLRQHVTSVNGNLLTRVVPASIRGLFVDKEGTLGLIDDPH 354


>Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical
           protein K02B12.6 protein.
          Length = 134

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 291 TYYQPQSSDSYYGKYLDTRGYSTRQDYEYSARSTDH 398
           +YYQP  +D+Y  KY +T  Y    ++  + + + +
Sbjct: 34  SYYQPFQTDTYGSKYYNTESYGKYDEHGNNGKDSHY 69


>Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical
           protein ZK643.6 protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +1

Query: 61  PKNC--CRLCEDSHRICPRIVALG 126
           PK C  C +CED++++CP  V  G
Sbjct: 135 PKTCNACNICEDANKMCPIWVPRG 158


>Z95559-15|CAB63361.1|  917|Caenorhabditis elegans Hypothetical
           protein Y41E3.11 protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 217 RAPATHTTPLLMTTEPTATPIPMIPHIIN 303
           ++P   TTP+     PT TP+  IP ++N
Sbjct: 798 QSPRFATTPIPSVIPPTTTPVQQIPVMMN 826


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,286,563
Number of Sequences: 27780
Number of extensions: 182831
Number of successful extensions: 608
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)