Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25o14
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    26   0.38 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.3  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +2

Query: 305 DQRVLQRGIGWEI-CSSHGSYRLEAGHDGRGEVGTLRMPIQTGQFRLRTKLCGQQLGEGT 481
           DQ++    I ++I C   G   +  G +  GEV   +M  Q    +  ++ CG+ +G   
Sbjct: 101 DQKIEINFITFDIPCEHRGLVSIIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNIGMKR 160

Query: 482 LH*RSRDSGVCFRCHSKGS*GLRLPARF 565
           +   S++  V      K   G  L ARF
Sbjct: 161 IFTSSQNIAVIEYRIPKSGKGFSLFARF 188


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 621 RVAYLIRNRYRHLASVTSENLAGNRS 544
           R++ +I +R+R+L +  SEN+   R+
Sbjct: 220 RISCVIASRHRNLEATESENVRPRRN 245


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 260 IDAVLVRYHLPELSADLVSTRTDLEIDNFPHLVNL 156
           IDA+   +    L  +  + RTDL  D++  LV+L
Sbjct: 222 IDAINHMFEDARLLDEPSANRTDLSKDDYESLVHL 256


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 241 LTSTASIQADATTATPTCNSKGSTCTTTRHRLGN 342
           L ST S+       TP+  S  STC   +   G+
Sbjct: 556 LKSTVSLLPLPLARTPSVMSASSTCKKDKKNAGS 589


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,528
Number of Sequences: 438
Number of extensions: 3591
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)