Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25o07
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.9  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 18  YTNRQIEINTLFIYNFHIISVYITYLFIYCNIHYLYLF 131
           YT+ + E+   +IY   +  V   Y FI  +IH+  LF
Sbjct: 431 YTDWE-EVYNGYIYQKMVADVVGDYFFICPSIHFAQLF 467


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 18  YTNRQIEINTLFIYNFHIISVYITYLFIYCNIHYLYLF 131
           YT+ + E+   +IY   +  V   Y FI  +IH+  LF
Sbjct: 431 YTDWE-EVYNGYIYQKMVADVVGDYFFICPSIHFAQLF 467


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 427  VAAYEFTTLTTVPGCI 474
            VA YEF TLT   G I
Sbjct: 1544 VAEYEFATLTVTGGTI 1559


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 89  SNVYRNYMKIVNEKR 45
           + +Y N MKIV+EK+
Sbjct: 338 NELYANLMKIVHEKQ 352


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 89  SNVYRNYMKIVNEKR 45
           + +Y N MKIV+EK+
Sbjct: 376 NELYANLMKIVHEKQ 390


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 228 YCASFGYIKGSFG 266
           +C +FG + G FG
Sbjct: 246 FCITFGLVAGQFG 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,400
Number of Sequences: 438
Number of extensions: 4033
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)