Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte25o06
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    35   0.003
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    35   0.003
AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    31   0.006
Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical p...    29   0.069
Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical pr...    29   0.069
Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical pr...    28   0.19 
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    32   0.31 
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    32   0.31 
AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical...    32   0.31 
AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical ...    28   0.33 
AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical ...    28   0.33 
U97003-1|AAB52270.2|  527|Caenorhabditis elegans Udp-glucuronosy...    28   6.7  

>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 35.1 bits (77), Expect(2) = 0.003
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
 Frame = +1

Query: 187 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 366
           K  H A D++V+  R   ++ +L+  +IS+DV+  D+                      +
Sbjct: 68  KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126

Query: 367 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVK 501
                 +    + +++    I D++  +ER+YP    V  +G T EGR ++
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQ 177



 Score = 23.0 bits (47), Expect(2) = 0.003
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +1

Query: 586 QMLKISNSNARNTA--VWLDGTIHAR 657
           Q +KI +   RN     W+DG IHAR
Sbjct: 177 QGIKIGSQVWRNDKRIFWIDGGIHAR 202


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 35.1 bits (77), Expect(2) = 0.003
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
 Frame = +1

Query: 187 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 366
           K  H A D++V+  R   ++ +L+  +IS+DV+  D+                      +
Sbjct: 68  KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126

Query: 367 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVK 501
                 +    + +++    I D++  +ER+YP    V  +G T EGR ++
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQ 177



 Score = 23.0 bits (47), Expect(2) = 0.003
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +1

Query: 586 QMLKISNSNARNTA--VWLDGTIHAR 657
           Q +KI +   RN     W+DG IHAR
Sbjct: 177 QGIKIGSQVWRNDKRIFWIDGGIHAR 202


>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 31.1 bits (67), Expect(2) = 0.006
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 409 IYDFLDALERQYPSICTVTVIGNTVEGRDVKLSENT*RRS 528
           + ++L++L   YP + +V  IG T EGR + L + T +R+
Sbjct: 131 VINYLNSLAITYPELVSVQPIGTTHEGRQIPLIKITNKRN 170



 Score = 25.8 bits (54), Expect(2) = 0.006
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +1

Query: 589 MLKISNSNARNT--AVWLDGTIHAR 657
           ++KI+N     T   +W+DG IHAR
Sbjct: 162 LIKITNKRNGGTKRGIWVDGGIHAR 186


>Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 29.5 bits (63), Expect(2) = 0.069
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 418 FLDALERQYPSICTVTVIGNTVEGRDV 498
           FL++L +QYP+   +  IGN+ EGR +
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSI 154



 Score = 23.8 bits (49), Expect(2) = 0.069
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 592 LKISNSNARNTAVWLDGTIHAR 657
           ++I++  +    VW+D  IHAR
Sbjct: 157 VRIADDGSSKPIVWIDAGIHAR 178


>Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 29.5 bits (63), Expect(2) = 0.069
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 418 FLDALERQYPSICTVTVIGNTVEGRDV 498
           FL++L +QYP+   +  IGN+ EGR +
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSI 154



 Score = 23.8 bits (49), Expect(2) = 0.069
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 592 LKISNSNARNTAVWLDGTIHAR 657
           ++I++  +    VW+D  IHAR
Sbjct: 157 VRIADDGSSKPIVWIDAGIHAR 178


>Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical
           protein R11A5.7 protein.
          Length = 664

 Score = 28.3 bits (60), Expect(2) = 0.19
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 592 LKI-SNSNARNTAVWLDGTIHAR 657
           LKI + S+ +  AVW+DG IHAR
Sbjct: 199 LKIGARSSHKKRAVWVDGNIHAR 221



 Score = 23.4 bits (48), Expect(2) = 0.19
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 418 FLDALERQYPSICTVTVIGNTVEGRDVK 501
           ++  +E  YP I  +  IG T EG+ ++
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIE 197


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 388 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDV 498
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 388 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDV 498
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131


>AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19c protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 388 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDV 498
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDI 131


>AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical
           protein T06A4.3a protein.
          Length = 505

 Score = 28.3 bits (60), Expect(2) = 0.33
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
 Frame = +1

Query: 187 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 366
           K++H   DV+V+   +      L+  DIS+    +D+                       
Sbjct: 58  KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117

Query: 367 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDV 498
             S   D+  +     + D++  L  +YP +     IG T EGR++
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNI 163



 Score = 22.6 bits (46), Expect(2) = 0.33
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 592 LKISNSNARNTAVWLDGTIHAR 657
           ++I   +      W+DG IHAR
Sbjct: 166 VEIGGDSRTKKIFWIDGGIHAR 187


>AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical
           protein T06A4.3b protein.
          Length = 455

 Score = 28.3 bits (60), Expect(2) = 0.33
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
 Frame = +1

Query: 187 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 366
           K++H   DV+V+   +      L+  DIS+    +D+                       
Sbjct: 58  KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117

Query: 367 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDV 498
             S   D+  +     + D++  L  +YP +     IG T EGR++
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNI 163



 Score = 22.6 bits (46), Expect(2) = 0.33
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 592 LKISNSNARNTAVWLDGTIHAR 657
           ++I   +      W+DG IHAR
Sbjct: 166 VEIGGDSRTKKIFWIDGGIHAR 187


>U97003-1|AAB52270.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein32 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 434 SANTRRFAR*PLLAIQWKAGMSSFQKIRDVGHDFIYLE 547
           S N+    R  +  +  K+ + +FQKIRD  H+ ++ E
Sbjct: 400 SRNSNMLGRQEMSIVLHKSDLGNFQKIRDAFHEILHNE 437


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,114,229
Number of Sequences: 27780
Number of extensions: 320981
Number of successful extensions: 793
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)