Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte25o02
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20362-1|AAA86720.1| 824|Homo sapiens Tg737 protein. 91 5e-18
BC030776-1|AAH30776.2| 833|Homo sapiens intraflagellar transpor... 90 6e-18
AL590096-4|CAM20430.1| 824|Homo sapiens intraflagellar transpor... 90 6e-18
AL590096-3|CAI14390.2| 833|Homo sapiens intraflagellar transpor... 90 6e-18
AL161772-3|CAM13405.1| 824|Homo sapiens intraflagellar transpor... 90 6e-18
AL161772-2|CAH70874.2| 833|Homo sapiens intraflagellar transpor... 90 6e-18
BX640833-1|CAE45907.1| 371|Homo sapiens hypothetical protein pr... 46 2e-04
AL590096-5|CAI14391.1| 50|Homo sapiens intraflagellar transpor... 38 0.027
AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein. 36 0.11
BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-l... 33 1.3
AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-l... 33 1.3
AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent ... 33 1.3
AL590822-6|CAO72140.1| 194|Homo sapiens chromosome 1 open readi... 32 1.8
AL590822-5|CAO72139.1| 192|Homo sapiens chromosome 1 open readi... 32 1.8
BC014109-1|AAH14109.1| 670|Homo sapiens leucine rich repeat con... 32 2.3
AL590822-7|CAO72141.1| 146|Homo sapiens chromosome 1 open readi... 31 3.1
AK090428-1|BAC03409.1| 339|Homo sapiens FLJ00345 protein protein. 31 3.1
AK097079-1|BAC04943.1| 128|Homo sapiens protein ( Homo sapiens ... 31 5.4
>U20362-1|AAA86720.1| 824|Homo sapiens Tg737 protein.
Length = 824
Score = 90.6 bits (215), Expect = 5e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 180 RQREQVTTPENINLDLTYSVLSNLA 204
>BC030776-1|AAH30776.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 90.2 bits (214), Expect = 6e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLA 213
>AL590096-4|CAM20430.1| 824|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 824
Score = 90.2 bits (214), Expect = 6e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 180 RQREQVTTPENINLDLTYSVLFNLA 204
>AL590096-3|CAI14390.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 90.2 bits (214), Expect = 6e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLA 213
>AL161772-3|CAM13405.1| 824|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 824
Score = 90.2 bits (214), Expect = 6e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 180 RQREQVTTPENINLDLTYSVLFNLA 204
>AL161772-2|CAH70874.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 90.2 bits (214), Expect = 6e-18
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 321
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 322 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 435
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 436 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 615
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 616 RMQEQANLGDTHNLDLTFAVLCNLA 690
R +EQ + NLDLT++VL NLA
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLA 213
>BX640833-1|CAE45907.1| 371|Homo sapiens hypothetical protein
protein.
Length = 371
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 556 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLA 690
DL AL KA++A ER L+R +EQ + NLDLT++VL NLA
Sbjct: 1 DLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLA 45
>AL590096-5|CAI14391.1| 50|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 50
Score = 38.3 bits (85), Expect = 0.027
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 157 EDDELYSGFNEVAPALDTRNLREDETFQETLRTA 258
++D+LYSG+N+ P D L D FQ+ +RT+
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTS 45
>AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein.
Length = 274
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -2
Query: 328 LACLPCQAAPSQCPYGWVTFSRSQPFSKFPGTFRLPSGSACPGPEP 191
L CLPC A P CP W T+ P S GT LP ACPGP P
Sbjct: 170 LPCLPCPALP--CPEVWGTW----PCSGVWGT--LPWAPACPGPLP 207
>BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 32.7 bits (71), Expect = 1.3
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 181 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 354
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 355 ARPVTALRAAGYTSASRDRPMPTQHLEDS 441
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 32.7 bits (71), Expect = 1.3
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 181 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 354
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 355 ARPVTALRAAGYTSASRDRPMPTQHLEDS 441
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent
mitochondrial RNA helicase protein.
Length = 786
Score = 32.7 bits (71), Expect = 1.3
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 181 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 354
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 355 ARPVTALRAAGYTSASRDRPMPTQHLEDS 441
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>AL590822-6|CAO72140.1| 194|Homo sapiens chromosome 1 open reading
frame 86 protein.
Length = 194
Score = 32.3 bits (70), Expect = 1.8
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = -2
Query: 688 PSYKAQQKSNPSCECHPSSLVLACE*AVVPSWTPLEP-LQVPGPSHVLF**YYHHQDLVG 512
PS A P C P+ + SWTP P L PG S+ L H +
Sbjct: 57 PSLPAFPGQEPRCGPEPTEVFTVGPKTF--SWTPFPPDLWGPGRSYRLLHGAGGHLESPA 114
Query: 511 RSVNKTPPPMP*FVLPFA*RDLRRCLPNVEWAWVDRVTPRCTQQRAVRSRDVL-MYRTSN 335
RS+ + P P P A R ++ P+VE A R P C ++ A RS++ M R +
Sbjct: 115 RSLPQRPAPDP----CRAPRVEQQ--PSVEGAAALRSCPMCQKEFAPRSKNSSGMRRHRS 168
Query: 334 PRLA 323
P+LA
Sbjct: 169 PKLA 172
>AL590822-5|CAO72139.1| 192|Homo sapiens chromosome 1 open reading
frame 86 protein.
Length = 192
Score = 32.3 bits (70), Expect = 1.8
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = -2
Query: 688 PSYKAQQKSNPSCECHPSSLVLACE*AVVPSWTPLEP-LQVPGPSHVLF**YYHHQDLVG 512
PS A P C P+ + SWTP P L PG S+ L H +
Sbjct: 55 PSLPAFPGQEPRCGPEPTEVFTVGPKTF--SWTPFPPDLWGPGRSYRLLHGAGGHLESPA 112
Query: 511 RSVNKTPPPMP*FVLPFA*RDLRRCLPNVEWAWVDRVTPRCTQQRAVRSRDVL-MYRTSN 335
RS+ + P P P A R ++ P+VE A R P C ++ A RS++ M R +
Sbjct: 113 RSLPQRPAPDP----CRAPRVEQQ--PSVEGAAALRSCPMCQKEFAPRSKNSSGMRRHRS 166
Query: 334 PRLA 323
P+LA
Sbjct: 167 PKLA 170
>BC014109-1|AAH14109.1| 670|Homo sapiens leucine rich repeat
containing 45 protein.
Length = 670
Score = 31.9 bits (69), Expect = 2.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 424 QHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKA-QEASTM 600
Q LEDS R+K++E L E + R + + E +L + A A E
Sbjct: 424 QSLEDSESLRIKEVEHMTRHLEESEKAMQERVQRLEAARLSLEEELSRVKAAALSERGQA 483
Query: 601 ERQLIRMQEQANLGDTHNL 657
E +LI+ + QA L + L
Sbjct: 484 EEELIKAKSQARLEEQQRL 502
>AL590822-7|CAO72141.1| 146|Homo sapiens chromosome 1 open reading
frame 86 protein.
Length = 146
Score = 31.5 bits (68), Expect = 3.1
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -2
Query: 598 SWTPLEP-LQVPGPSHVLF**YYHHQDLVGRSVNKTPPPMP*FVLPFA*RDLRRCLPNVE 422
SWTP P L PG S+ L H + RS+ + P P P A R ++ P+VE
Sbjct: 37 SWTPFPPDLWGPGRSYRLLHGAGGHLESPARSLPQRPAPDP----CRAPRVEQQ--PSVE 90
Query: 421 WAWVDRVTPRCTQQRAVRSRDVL-MYRTSNPRLA 323
A R P C ++ A RS++ M R +P+LA
Sbjct: 91 GAAALRSCPMCQKEFAPRSKNSSGMRRHRSPKLA 124
>AK090428-1|BAC03409.1| 339|Homo sapiens FLJ00345 protein protein.
Length = 339
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = -2
Query: 493 PPPMP*FVLPFA*RDLRRCLPNVEWAWVDRVTPRCTQQRAVRSRDVLMYRTSNPRLACLP 314
PPP +LP+ R P W W+ R T R + M S P LP
Sbjct: 17 PPPACALLLPWP-RTWVFPSPASGWRWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLP 75
Query: 313 CQAAPSQCP 287
C+ P CP
Sbjct: 76 CRRDPRVCP 84
>AK097079-1|BAC04943.1| 128|Homo sapiens protein ( Homo sapiens
cDNA FLJ39760 fis, clone SMINT2019200. ).
Length = 128
Score = 30.7 bits (66), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 262 SQPFSKFPGTFRLPSGSACPGPEP 191
S PFS G+F+ PSG+ P P+P
Sbjct: 26 SVPFSSLAGSFQSPSGAVLPLPDP 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,874,422
Number of Sequences: 237096
Number of extensions: 3049338
Number of successful extensions: 8310
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8291
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -